RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 K7ESF4 209 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 STK25O00506 426 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 LUC7L3O95232 432 aaKnown RBP11.81□□□□□ -0.52
SNX1-204ENST00000559061 H2AFZP0C0S5 128 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 MIPP30301 263 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 GRIA2P42262 883 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 SATB1Q01826 763 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 NRG1Q02297 640 aaPredicted RBP11.81□□□□□ -0.52
SNX1-204ENST00000559061 SLC25A11Q02978 314 aaKnown RBP11.81□□□□□ -0.52
SNX1-204ENST00000559061 DMWDQ09019 674 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 GRSF1Q12849 480 aaKnown RBP eCLIP11.81□□□□□ -0.52
SNX1-204ENST00000559061 PTPRNQ16849 979 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 DGKKQ5KSL6 1271 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 H2AFVQ71UI9 128 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 NLRP14Q86W24 1093 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 SUGP1Q8IWZ8 645 aaKnown RBP11.81□□□□□ -0.52
SNX1-204ENST00000559061 NIPA2Q8N8Q9 360 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 IL17RCQ8NAC3 791 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 ZNF564Q8TBZ8 553 aaPredicted RBP11.81□□□□□ -0.52
SNX1-204ENST00000559061 RNF34Q969K3 372 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 MYO19Q96H55 970 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 C1orf74Q96LT6 269 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 IRX2Q9BZI1 471 aaPredicted RBP11.81□□□□□ -0.52
SNX1-204ENST00000559061 SIK2Q9H0K1 926 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 NDFIP2Q9NV92 336 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 MPP6Q9NZW5 540 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 STIM2Q9P246 746 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 DEC1Q9P2X7 70 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 STARD13Q9Y3M8 1113 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 OR51B4Q9Y5P0 310 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 SCINQ9Y6U3 715 aa11.81□□□□□ -0.52
SNX1-204ENST00000559061 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.8□□□□□ -0.52
SNX1-204ENST00000559061 CHURC1-FNTBB4DL54 471 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 EIF3CLB5ME19 914 aaKnown RBP11.8□□□□□ -0.52
SNX1-204ENST00000559061 F5H5T6 163 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 SGK1O00141 431 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 GALR2O43603 387 aaPredicted RBP11.8□□□□□ -0.52
SNX1-204ENST00000559061 MTA2O94776 668 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 LRIG2O94898 1065 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 NDUFA10O95299 355 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 APODP05090 189 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 COL9A1P20849 921 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 MZF1P28698 734 aaPredicted RBP11.8□□□□□ -0.52
SNX1-204ENST00000559061 NUMBP49757 651 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 ENPP2Q13822 863 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 TCEAL1Q15170 157 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 C10orf76Q5T2E6 689 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 TSSK4Q6SA08 328 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 MAMSTRQ6ZN01 415 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 APCDD1Q8J025 514 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 CCAR2Q8N163 923 aaKnown RBP11.8□□□□□ -0.52
SNX1-204ENST00000559061 ACRBPQ8NEB7 543 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 RPLP0P6Q8NHW5 317 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 FIBINQ8TAL6 211 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 XPO6Q96QU8 1125 aaKnown RBP11.8□□□□□ -0.52
SNX1-204ENST00000559061 EIF3CQ99613 913 aaKnown RBP11.8□□□□□ -0.52
SNX1-204ENST00000559061 SNRNP25Q9BV90 132 aaKnown RBP11.8□□□□□ -0.52
SNX1-204ENST00000559061 SLC2A11Q9BYW1 496 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 OSBPL2Q9H1P3 480 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 DEF6Q9H4E7 631 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 ABCB8Q9NUT2 735 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 ANAPC7Q9UJX3 599 aa11.8□□□□□ -0.52
SNX1-204ENST00000559061 VPS13AQ96RL7 3174 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 MUC6Q6W4X9 2439 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 A0A1B0GVM2 712 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 TCAF2A6NFQ2 919 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 CYBBP04839 570 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 PABPC1P11940 636 aaKnown RBP11.79□□□□□ -0.52
SNX1-204ENST00000559061 CSKP41240 450 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 CTSOP43234 321 aaPredicted RBP11.79□□□□□ -0.52
SNX1-204ENST00000559061 TNFRSF4P43489 277 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 ARSEP51690 589 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 TAS2R40P59535 323 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 AMPD2Q01433 879 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 LRRC32Q14392 662 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 C2orf27AQ580R0 203 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 TMEM92Q6UXU6 159 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 SND1Q7KZF4 910 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNX1-204ENST00000559061 CHST9Q7L1S5 443 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 ANKS1BQ7Z6G8 1248 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 TMTC1Q8IUR5 882 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 MFN1Q8IWA4 741 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 CCDC170Q8IYT3 715 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 SYNPOQ8N3V7 929 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 CARNMT1Q8N4J0 409 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 SPEM1Q8N4L4 309 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 ALLCQ8N6M5 410 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 SLC35G2Q8TBE7 412 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 NELL1Q92832 810 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 MRGPRX3Q96LB0 322 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 RPRD1AQ96P16 312 aaPredicted RBP11.79□□□□□ -0.52
SNX1-204ENST00000559061 KCTD15Q96SI1 283 aaPredicted RBP11.79□□□□□ -0.52
SNX1-204ENST00000559061 PSMB7Q99436 277 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 BAG1Q99933 345 aaPredicted RBP11.79□□□□□ -0.52
SNX1-204ENST00000559061 DDX50Q9BQ39 737 aaKnown RBP11.79□□□□□ -0.52
SNX1-204ENST00000559061 LACRTQ9GZZ8 138 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 NOL6Q9H6R4 1146 aaKnown RBP11.79□□□□□ -0.52
SNX1-204ENST00000559061 MRPL47Q9HD33 250 aaKnown RBP11.79□□□□□ -0.52
SNX1-204ENST00000559061 UVRAGQ9P2Y5 699 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 PPARGC1AQ9UBK2 798 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms