RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 MFSD7Q6UXD7 560 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 RFX8Q6ZV50 586 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 CHST9Q7L1S5 443 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 FAM72BQ86X60 149 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 CIR1Q86X95 450 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 TMEM25Q86YD3 366 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 RFX6Q8HWS3 928 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 MFN1Q8IWA4 741 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 RCOR2Q8IZ40 523 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 ADGRG2Q8IZP9 1017 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 CFAP52Q8N1V2 620 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 CARNMT1Q8N4J0 409 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 ZNF557Q8N988 423 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 EXD1Q8NHP7 514 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 TTC8Q8TAM2 541 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 RAPGEF5Q92565 580 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 DNASE1L2Q92874 299 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 IGSF8Q969P0 613 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 EXOC4Q96A65 974 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 TTC28Q96AY4 2481 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 RNF25Q96BH1 459 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 HES6Q96HZ4 224 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 C16orf45Q96MC5 204 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 PRICKLE1Q96MT3 831 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 CSPG4P5Q96PW8 444 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 XPO6Q96QU8 1125 aaKnown RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 NAPGQ99747 312 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 PRMT1Q99873 361 aaKnown RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 ZNF670Q9BS34 389 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 MAK16Q9BXY0 300 aaKnown RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 MAGEB5Q9BZ81 275 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 ZYG11BQ9C0D3 744 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 HPS4Q9NQG7 708 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 DONSONQ9NYP3 566 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 PLK2Q9NYY3 685 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 MPP6Q9NZW5 540 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 CWC15Q9P013 229 aaKnown RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 MARK1Q9P0L2 795 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 RCOR3Q9P2K3 495 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 PPARGC1AQ9UBK2 798 aaKnown RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 SORCS3Q9UPU3 1222 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 UNC80Q8N2C7 3258 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 HELZP42694 1942 aaKnown RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 IGLV3-10A0A075B6K4 115 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 CTAGE9A4FU28 777 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 C19orf67A6NJJ6 358 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 DRGXA6NNA5 263 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 KIF2AO00139 706 aaPredicted RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 GFRA2O00451 464 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 ENC1O14682 589 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 APOL1O14791 398 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 DDX3YO15523 660 aaKnown RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 HOXC11O43248 304 aaPredicted RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 NARSO43776 548 aaKnown RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 CNTN5O94779 1100 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 LUC7L3O95232 432 aaKnown RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 PENKP01210 267 aaPredicted RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 TUBB4AP04350 444 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 ATP1A1P05023 1023 aaKnown RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 RHOCP08134 193 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 CD48P09326 243 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 ZFXP17010 805 aaPredicted RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 HOXD9P28356 352 aaPredicted RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 OR1E1P30953 314 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 HOXC13P31276 330 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 CASQ1P31415 396 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 GJA4P35212 333 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 SERPINB6P35237 376 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 HCAR3P49019 387 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 MAPKAPK2P49137 400 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 PEX5P50542 639 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 SGSHP51688 502 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 ARSEP51690 589 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 OXCT1P55809 520 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 COPS2P61201 443 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 ETF1P62495 437 aaKnown RBP6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 DYNLT1P63172 113 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 MMRN1Q13201 1228 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 TFDP2Q14188 446 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 PPP2R5EQ16537 467 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 C5orf22Q49AR2 442 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 ANKRD20A8PQ5CZ79 823 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 MPP7Q5T2T1 576 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 C6orf118Q5T5N4 469 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 CCDC181Q5TID7 509 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 FYB2Q5VWT5 728 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 KAZNQ674X7 775 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 GRAMD4Q6IC98 578 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 TMCO3Q6UWJ1 677 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 SPOCD1Q6ZMY3 1216 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 TFAP2DQ7Z6R9 452 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 VSIG1Q86XK7 387 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 ZNF354CQ86Y25 554 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 RNF135Q8IUD6 432 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 ZNF683Q8IZ20 524 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 GJD3Q8N144 294 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 NAT16Q8N8M0 369 aa6.79□□□□□ -1.32
CHRNA3-204ENST00000559002 RTL3Q8N8U3 475 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms