RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 SHOC2Q9UQ13 582 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 LAMA2P24043 3122 aaKnown RBP12.47□□□□□ -0.41
SEC11A-206ENST00000558924 ZBTB42B2RXF5 422 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 APOC4-APOC2K7ER74 178 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 TPST1O60507 370 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 TMCC1O94876 653 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 C22orf31O95567 290 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 APOC2P02655 101 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 TPH1P17752 444 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 NDUFV1P49821 464 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 NUDT2P50583 147 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 ADARP55265 1226 aaKnown RBP12.47□□□□□ -0.41
SEC11A-206ENST00000558924 MAP3K7CLP57077 242 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 PITX1P78337 314 aaPredicted RBP12.47□□□□□ -0.41
SEC11A-206ENST00000558924 MRPS22P82650 360 aaKnown RBP12.47□□□□□ -0.41
SEC11A-206ENST00000558924 HPCAP84074 193 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 OASLQ15646 514 aaKnown RBP12.47□□□□□ -0.41
SEC11A-206ENST00000558924 CNGA3Q16281 694 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 NRF1Q16656 503 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 GEN1Q17RS7 908 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 N4BP2L1Q5TBK1 243 aaPredicted RBP12.47□□□□□ -0.41
SEC11A-206ENST00000558924 CMC1Q7Z7K0 106 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 RIN3Q8TB24 985 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 ZMAT2Q96NC0 199 aaKnown RBP12.47□□□□□ -0.41
SEC11A-206ENST00000558924 ZNF518BQ9C0D4 1074 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 FZD8Q9H461 694 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 ACSS3Q9H6R3 686 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 STX18Q9P2W9 335 aaKnown RBP12.47□□□□□ -0.41
SEC11A-206ENST00000558924 AP4E1Q9UPM8 1137 aa12.47□□□□□ -0.41
SEC11A-206ENST00000558924 LAMA3Q16787 3333 aa12.46□□□□□ -0.41
SEC11A-206ENST00000558924 M0QYT0 321 aa12.46□□□□□ -0.41
SEC11A-206ENST00000558924 VARSP26640 1264 aaKnown RBP12.46□□□□□ -0.41
SEC11A-206ENST00000558924 PSMD7P51665 324 aa12.46□□□□□ -0.41
SEC11A-206ENST00000558924 SLC25A11Q02978 314 aaKnown RBP12.46□□□□□ -0.41
SEC11A-206ENST00000558924 SFT2D3Q587I9 215 aa12.46□□□□□ -0.41
SEC11A-206ENST00000558924 ICA1LQ8NDH6 482 aa12.46□□□□□ -0.41
SEC11A-206ENST00000558924 SLC7A14Q8TBB6 771 aa12.46□□□□□ -0.41
SEC11A-206ENST00000558924 LPPQ93052 612 aa12.46□□□□□ -0.41
SEC11A-206ENST00000558924 APOPT1Q96IL0 206 aa12.46□□□□□ -0.41
SEC11A-206ENST00000558924 ADA2Q9NZK5 511 aa12.46□□□□□ -0.41
SEC11A-206ENST00000558924 FNDC3AQ9Y2H6 1198 aaKnown RBP12.46□□□□□ -0.41
SEC11A-206ENST00000558924 WDR27A2RRH5 827 aa12.46□□□□□ -0.42
SEC11A-206ENST00000558924 B4GALT4O60513 344 aa12.46□□□□□ -0.42
SEC11A-206ENST00000558924 ITGBL1O95965 494 aaPredicted RBP12.46□□□□□ -0.42
SEC11A-206ENST00000558924 AQP4P55087 323 aa12.46□□□□□ -0.42
SEC11A-206ENST00000558924 MAP7Q14244 749 aa12.46□□□□□ -0.42
SEC11A-206ENST00000558924 SH2D4BQ5SQS7 431 aa12.46□□□□□ -0.42
SEC11A-206ENST00000558924 SLC26A11Q86WA9 606 aa12.46□□□□□ -0.42
SEC11A-206ENST00000558924 TTC30AQ86WT1 665 aa12.46□□□□□ -0.42
SEC11A-206ENST00000558924 CELF6Q96J87 481 aaKnown RBP12.46□□□□□ -0.42
SEC11A-206ENST00000558924 PANX3Q96QZ0 392 aa12.46□□□□□ -0.42
SEC11A-206ENST00000558924 XAB2Q9HCS7 855 aaKnown RBP12.46□□□□□ -0.42
SEC11A-206ENST00000558924 COMMD3-BMI1R4GMX3 469 aa12.46□□□□□ -0.42
SEC11A-206ENST00000558924 COL2A1P02458 1487 aaPredicted RBP12.46□□□□□ -0.42
SEC11A-206ENST00000558924 CASTOR2A6NHX0 329 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 PRPF4O43172 522 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEC11A-206ENST00000558924 ITM2AO43736 263 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 CSPG5O95196 566 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 ITGAVP06756 1048 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 ARL1P40616 181 aaPredicted RBP12.45□□□□□ -0.42
SEC11A-206ENST00000558924 GK3PQ14409 553 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 CMPK2Q5EBM0 449 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 TTC39BQ5VTQ0 682 aaPredicted RBP12.45□□□□□ -0.42
SEC11A-206ENST00000558924 LRRC8BQ6P9F7 803 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 TMPRSS6Q8IU80 811 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 DEFB106AQ8N104 65 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 BANPQ8N9N5 519 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 LRGUKQ96M69 825 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 PFDN4Q9NQP4 134 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 SNX10Q9Y5X0 201 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 ZNFX1Q9P2E3 1918 aaKnown RBP12.45□□□□□ -0.42
SEC11A-206ENST00000558924 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 ERVK-10P10266 1014 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 CYP3A5P20815 502 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 TP53INP2Q8IXH6 220 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 STKLD1Q8NE28 680 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 RNF157Q96PX1 679 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 PRPF18Q99633 342 aaKnown RBP12.45□□□□□ -0.42
SEC11A-206ENST00000558924 TAGLN3Q9UI15 199 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 PAPSS1O43252 624 aaPredicted RBP12.45□□□□□ -0.42
SEC11A-206ENST00000558924 PIGRP01833 764 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 IGFBP6P24592 240 aaPredicted RBP12.45□□□□□ -0.42
SEC11A-206ENST00000558924 ZNF143P52747 638 aaPredicted RBP12.45□□□□□ -0.42
SEC11A-206ENST00000558924 CCDC14Q49A88 953 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 CCDC185Q8N715 623 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 PAF1Q8N7H5 531 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 PLD5Q8N7P1 536 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 APPL2Q8NEU8 664 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 SLC35B2Q8TB61 432 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 EXT2Q93063 718 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 WDR55Q9H6Y2 383 aaPredicted RBP12.45□□□□□ -0.42
SEC11A-206ENST00000558924 IL1RL2Q9HB29 575 aa12.45□□□□□ -0.42
SEC11A-206ENST00000558924 TRIM43BA6NCK2 446 aa12.44□□□□□ -0.42
SEC11A-206ENST00000558924 TSPAN1O60635 241 aa12.44□□□□□ -0.42
SEC11A-206ENST00000558924 STAMBPO95630 424 aa12.44□□□□□ -0.42
SEC11A-206ENST00000558924 PENKP01210 267 aaPredicted RBP12.44□□□□□ -0.42
SEC11A-206ENST00000558924 COPAP53621 1224 aa12.44□□□□□ -0.42
SEC11A-206ENST00000558924 ARPP19P56211 112 aa12.44□□□□□ -0.42
SEC11A-206ENST00000558924 NME5P56597 212 aa12.44□□□□□ -0.42
SEC11A-206ENST00000558924 TRNP1Q6NT89 227 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms