RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 F8VZ95 297 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 NDUFS2O75306 463 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 GRAP2O75791 330 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 CYP11B1P15538 503 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 SCNN1AP37088 669 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 CSKP41240 450 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 CDK17Q00537 523 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 SLC6A3Q01959 620 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 ARID5BQ14865 1188 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 CACUL1Q86Y37 369 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 ZDHHC17Q8IUH5 632 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 CFAP52Q8N1V2 620 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 KDM1BQ8NB78 822 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 CADM4Q8NFZ8 388 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 EPS8L1Q8TE68 723 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 DNASE2BQ8WZ79 361 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 ADAM33Q9BZ11 813 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 PRSS16Q9NQE7 514 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 DDIT4Q9NX09 232 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 TAB2Q9NYJ8 693 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 SLC6A14Q9UN76 642 aa17.6■□□□□ 0.41
LRRC28-210ENST00000558879 ACACBO00763 2458 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 F5H5T6 163 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 CFIP05156 583 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 SLC2A3P11169 496 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 PMLP29590 882 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 OXTRP30559 389 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 CCR1P32246 355 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 NOS2P35228 1153 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 GABRB2P47870 512 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 KRT31Q15323 416 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 PLEKHG6Q3KR16 790 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 PITRM1Q5JRX3 1037 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 TTC39BQ5VTQ0 682 aaPredicted RBP17.59■□□□□ 0.41
LRRC28-210ENST00000558879 OR6B2Q6IFH4 312 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 MMS22LQ6ZRQ5 1243 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 CARNMT1Q8N4J0 409 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 TMEM35BQ8NCS4 154 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 NPY6RQ99463 290 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 GPR174Q9BXC1 333 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 PCED1AQ9H1Q7 454 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 FSCN3Q9NQT6 498 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 SUSD2Q9UGT4 822 aa17.59■□□□□ 0.41
LRRC28-210ENST00000558879 MAP1BP46821 2468 aaKnown RBP17.58■□□□□ 0.41
LRRC28-210ENST00000558879 A0A1B0GVM2 712 aa17.58■□□□□ 0.4
LRRC28-210ENST00000558879 TCAF2A6NFQ2 919 aa17.58■□□□□ 0.4
LRRC28-210ENST00000558879 PES1O00541 588 aaKnown RBP17.58■□□□□ 0.4
LRRC28-210ENST00000558879 ACADMP11310 421 aa17.58■□□□□ 0.4
LRRC28-210ENST00000558879 CSRP1P21291 193 aaKnown RBP17.58■□□□□ 0.4
LRRC28-210ENST00000558879 MATKP42679 507 aa17.58■□□□□ 0.4
LRRC28-210ENST00000558879 SNX16P57768 344 aa17.58■□□□□ 0.4
LRRC28-210ENST00000558879 RPS14P62263 151 aaKnown RBP17.58■□□□□ 0.4
LRRC28-210ENST00000558879 ZBTB16Q05516 673 aa17.58■□□□□ 0.4
LRRC28-210ENST00000558879 SYCP2LQ5T4T6 812 aa17.58■□□□□ 0.4
LRRC28-210ENST00000558879 N4BP2L1Q5TBK1 243 aaPredicted RBP17.58■□□□□ 0.4
LRRC28-210ENST00000558879 PSAPL1Q6NUJ1 521 aa17.58■□□□□ 0.4
LRRC28-210ENST00000558879 NOP9Q86U38 636 aaKnown RBP17.58■□□□□ 0.4
LRRC28-210ENST00000558879 NT5C3BQ969T7 300 aa17.58■□□□□ 0.4
LRRC28-210ENST00000558879 STK33Q9BYT3 514 aa17.58■□□□□ 0.4
LRRC28-210ENST00000558879 KIAA1522Q9P206 1035 aaPredicted RBP17.58■□□□□ 0.4
LRRC28-210ENST00000558879 METTL12A8MUP2 240 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 MEI4A8MW99 385 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 H0Y626 953 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 LSM8O95777 96 aaKnown RBP17.57■□□□□ 0.4
LRRC28-210ENST00000558879 SRPRAP08240 638 aaKnown RBP17.57■□□□□ 0.4
LRRC28-210ENST00000558879 ABCB4P21439 1286 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 KCNA4P22459 653 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 NOVA1P51513 510 aaKnown RBP17.57■□□□□ 0.4
LRRC28-210ENST00000558879 NOMO3P69849 1222 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 MTA1Q13330 715 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 HNRNPA1L2Q32P51 320 aaKnown RBP17.57■□□□□ 0.4
LRRC28-210ENST00000558879 C5orf22Q49AR2 442 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 WDR45BQ5MNZ6 344 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 CXorf57Q6NSI4 855 aaKnown RBP17.57■□□□□ 0.4
LRRC28-210ENST00000558879 FBXL22Q6P050 247 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 CIR1Q86X95 450 aaPredicted RBP17.57■□□□□ 0.4
LRRC28-210ENST00000558879 XYLT1Q86Y38 959 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 APCDD1Q8J025 514 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 CCAR2Q8N163 923 aaKnown RBP17.57■□□□□ 0.4
LRRC28-210ENST00000558879 PGAP3Q96FM1 320 aaPredicted RBP17.57■□□□□ 0.4
LRRC28-210ENST00000558879 NUP58Q9BVL2 599 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 RSPH9Q9H1X1 276 aaPredicted RBP17.57■□□□□ 0.4
LRRC28-210ENST00000558879 SYNCQ9H7C4 482 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 RRN3Q9NYV6 651 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 SUN2Q9UH99 717 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 SLC12A6Q9UHW9 1150 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 ERVW-1Q9UQF0 538 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 DAAM1Q9Y4D1 1078 aa17.57■□□□□ 0.4
LRRC28-210ENST00000558879 KNL1Q8NG31 2342 aa17.56■□□□□ 0.4
LRRC28-210ENST00000558879 CABIN1Q9Y6J0 2220 aa17.56■□□□□ 0.4
LRRC28-210ENST00000558879 SYNJ2BP-COX16A0A087WUM0 186 aa17.56■□□□□ 0.4
LRRC28-210ENST00000558879 UPK3BL1B0FP48 263 aa17.56■□□□□ 0.4
LRRC28-210ENST00000558879 UPK3BL2E5RIL1 263 aa17.56■□□□□ 0.4
LRRC28-210ENST00000558879 I6L893 689 aaPredicted RBP17.56■□□□□ 0.4
LRRC28-210ENST00000558879 ARHGAP33O14559 1287 aa17.56■□□□□ 0.4
LRRC28-210ENST00000558879 EPHB6O15197 1021 aa17.56■□□□□ 0.4
LRRC28-210ENST00000558879 SIN3BO75182 1162 aa17.56■□□□□ 0.4
LRRC28-210ENST00000558879 GJB3O75712 270 aa17.56■□□□□ 0.4
LRRC28-210ENST00000558879 TFE3P19532 575 aaPredicted RBP17.56■□□□□ 0.4
LRRC28-210ENST00000558879 MAOBP27338 520 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms