RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 PLXNA2O75051 1894 aa10.21□□□□□ -0.78
SPG11-212ENST00000558790 ANKRD17O75179 2603 aaKnown RBP10.2□□□□□ -0.78
SPG11-212ENST00000558790 RELNP78509 3460 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 A8MXQ7 604 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 PYCARD-AS1I3L0S3 204 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 RNF225M0QZC1 329 aaPredicted RBP10.2□□□□□ -0.78
SPG11-212ENST00000558790 EIF3DO15371 548 aaKnown RBP eCLIP10.2□□□□□ -0.78
SPG11-212ENST00000558790 OPHN1O60890 802 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 RTN3O95197 1032 aaPredicted RBP10.2□□□□□ -0.78
SPG11-212ENST00000558790 CD59P13987 128 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 TNNI1P19237 187 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 MAOBP27338 520 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 PGFP49763 221 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 TUBP50607 506 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 CYP2J2P51589 502 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 MYL6P60660 151 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 GFPT1Q06210 699 aaPredicted RBP10.2□□□□□ -0.78
SPG11-212ENST00000558790 ZNF33AQ06730 810 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 PSMD6Q15008 389 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 HECTD3Q5T447 861 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 SNX30Q5VWJ9 437 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 BTBD8Q5XKL5 378 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 SLC36A4Q6YBV0 504 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 SCARA5Q6ZMJ2 495 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 STXBP4Q6ZWJ1 553 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 EPM2AIP1Q7L775 607 aaPredicted RBP10.2□□□□□ -0.78
SPG11-212ENST00000558790 TMEM25Q86YD3 366 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 CHCHD4Q8N4Q1 142 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 CEP76Q8TAP6 659 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 CCDC127Q96BQ5 260 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 CAMK1GQ96NX5 476 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 USP28Q96RU2 1077 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 ACOX2Q99424 681 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 TRIM9Q9C026 710 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 XYLT2Q9H1B5 865 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 SLC6A17Q9H1V8 727 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 TNMDQ9H2S6 317 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 KIAA1586Q9HCI6 787 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 DMAP1Q9NPF5 467 aaPredicted RBP10.2□□□□□ -0.78
SPG11-212ENST00000558790 SPHK2Q9NRA0 654 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 KRT82Q9NSB4 513 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 DNAJC17Q9NVM6 304 aaKnown RBP10.2□□□□□ -0.78
SPG11-212ENST00000558790 DEC1Q9P2X7 70 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 CYP8B1Q9UNU6 501 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 RAXQ9Y2V3 346 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 RAI2Q9Y5P3 530 aa10.2□□□□□ -0.78
SPG11-212ENST00000558790 ATP8B3O60423 1300 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 UBE4BO95155 1302 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 NEDD8-MDP1E9PL57 170 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 TGFB1I1O43294 461 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 CACNG3O60359 315 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 ZDHHC11BP0C7U3 371 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 NTSR1P30989 418 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 POU4F3Q15319 338 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 GRAMD4Q6IC98 578 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 TOGARAM2Q6ZUX3 1019 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 PAQR9Q6ZVX9 377 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 RABEPKQ7Z6M1 372 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 TRIML1Q8N9V2 468 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 MDM1Q8TC05 714 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 IPO4Q8TEX9 1081 aaKnown RBP10.19□□□□□ -0.78
SPG11-212ENST00000558790 ELMO3Q96BJ8 720 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 SMARCD1Q96GM5 515 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 MED10Q9BTT4 135 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 CBX8Q9HC52 389 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 IL37Q9NZH6 218 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 CHORDC1Q9UHD1 332 aaPredicted RBP10.19□□□□□ -0.78
SPG11-212ENST00000558790 RAD54BQ9Y620 910 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 MORC2Q9Y6X9 1032 aaPredicted RBP10.19□□□□□ -0.78
SPG11-212ENST00000558790 KNTC1P50748 2209 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 MYLKQ15746 1914 aa10.19□□□□□ -0.78
SPG11-212ENST00000558790 FLNCQ14315 2725 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 LOC100289279A0A1B0GTE1 492 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 A0A1W2PQD8 194 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 FAM92AA1XBS5 289 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 FAM221BA6H8Z2 402 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 PRRT4C9JH25 899 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 H0Y626 953 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 CLIC2O15247 247 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 GREM1O60565 184 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 TLR5O60602 858 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 GJB3O75712 270 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 CLSTN1O94985 981 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 TRIM16O95361 564 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 DLGAP3O95886 979 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 CCDC130P13994 396 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 TYRP14679 529 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 NME2P22392 152 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 CASP4P49662 377 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 CDH8P55286 799 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 ASIC1P78348 528 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 FANCCQ00597 558 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 TRPC3Q13507 836 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 CUL4AQ13619 759 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 ZNF699Q32M78 642 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 PLEKHG6Q3KR16 790 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 PREPLQ4J6C6 727 aaPredicted RBP10.18□□□□□ -0.78
SPG11-212ENST00000558790 FAM26FQ5R3K3 315 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 ACAD11Q709F0 780 aa10.18□□□□□ -0.78
SPG11-212ENST00000558790 NAXDQ8IW45 347 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms