RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 HMGXB4Q9UGU5 601 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 TTLL3Q9Y4R7 772 aa4.24□□□□□ -1.73
ZEB1-212ENST00000558655 FAM92AA1XBS5 289 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 ZSCAN5CA6NGD5 496 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 F8W810 466 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 NCAM2O15394 837 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CYP26A1O43174 497 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 WEE2P0C1S8 567 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 SFTPCP11686 197 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 ATP6V1B1P15313 513 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 HOXA9P31269 272 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 LMAN1P49257 510 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 NDUFV1P49821 464 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 HADHBP55084 474 aaKnown RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CDH8P55286 799 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 USP46P62068 366 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 LRRC74AQ0VAA2 488 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 AP1B1Q10567 949 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 PTP4A2Q12974 167 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 KCNC3Q14003 757 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CAMK1Q14012 370 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 PPA1Q15181 289 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 SMAD2Q15796 467 aaKnown RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 SLC18A3Q16572 532 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CCNG2Q16589 344 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CLEC16AQ2KHT3 1053 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TTC31Q49AM3 519 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 SGO2Q562F6 1265 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TDRD12Q587J7 1177 aaKnown RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 RAB41Q5JT25 222 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 INTS11Q5TA45 600 aaKnown RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 FAM171A1Q5VUB5 890 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 HEATR6Q6AI08 1181 aaKnown RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TTC19Q6DKK2 380 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 FOXR1Q6PIV2 292 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TMEM270Q6UE05 265 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 VSTM1Q6UX27 236 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TMEM184AQ6ZMB5 413 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 C4orf50Q6ZRC1 276 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TAS1R1Q7RTX1 841 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 ZNF571Q7Z3V5 609 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TMCO2Q7Z6W1 182 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 ZER1Q7Z7L7 766 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TBC1D21Q8IYX1 336 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 FUKQ8N0W3 1084 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 ANKRD52Q8NB46 1076 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 SPPL2BQ8TCT7 592 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TFAP2BQ92481 460 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 RNF166Q96A37 237 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CDCA3Q99618 268 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CAPS2Q9BXY5 557 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 PACSIN1Q9BY11 444 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 B3GNT5Q9BYG0 378 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 DEF6Q9H4E7 631 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 MED4Q9NPJ6 270 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 FAM86C1Q9NVL1 165 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 ARGLU1Q9NWB6 273 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 ASNSD1Q9NWL6 643 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 DDX43Q9NXZ2 648 aaKnown RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 FAM53CQ9NYF3 392 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CACNG4Q9UBN1 327 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 AFF4Q9UHB7 1163 aaKnown RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CRYL1Q9Y2S2 319 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 PRG3Q9Y2Y8 225 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 PCDHB3Q9Y5E6 796 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 C17orf113A0A1B0GUU1 675 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TCRBV5S1A1TA0A578 114 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CTAGE15A4D2H0 777 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 C2orf71A6NGG8 1288 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 A8MXQ7 604 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 B9A039 149 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 HHLA1C9JL84 531 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 H3BRJ5 948 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 M0QX08 132 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 DDX3XO00571 662 aaKnown RBP eCLIP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 XPO1O14980 1071 aaKnown RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 AREL1O15033 823 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 LPXNO60711 386 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TGDSO95455 350 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 FTCDO95954 541 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 URODP06132 367 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CA3P07451 260 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CTAGE8P0CG41 777 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 MYBL1P10243 752 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 HAPLN1P10915 354 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-212ENST00000558655 LMO2P25791 158 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CA8P35219 290 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 CTNNB1P35222 781 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 MTHFRP42898 656 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 RABGGTBP53611 331 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 BCAT1P54687 386 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 NOMO3P69849 1222 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 AMPD2Q01433 879 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 KLHL30Q0D2K2 578 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 TRADDQ15628 312 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 SLC14A2Q15849 920 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 PSMD5Q16401 504 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 PPP2R5EQ16537 467 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 ZSCAN26Q16670 478 aa4.23□□□□□ -1.73
ZEB1-212ENST00000558655 ARHGAP44Q17R89 818 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms