RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 INTS6Q9UL03 887 aaKnown RBP16.04■□□□□ 0.16
CSHL1-208ENST00000558609 PI4KAP42356 2102 aa16.04■□□□□ 0.16
CSHL1-208ENST00000558609 CHD6Q8TD26 2715 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 NDUFS2O75306 463 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 LSM8O95777 96 aaKnown RBP16.03■□□□□ 0.16
CSHL1-208ENST00000558609 IGLV3-19P01714 112 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 ASLP04424 464 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 ABCB4P21439 1286 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 OXTRP30559 389 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 SCNN1AP37088 669 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 MATKP42679 507 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 TPMTP51580 245 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 MYL5Q02045 173 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 CDH18Q13634 790 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 TRIM61Q5EBN2 209 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 FSCBQ5H9T9 825 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 SLC23A3Q6PIS1 610 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 NOP9Q86U38 636 aaKnown RBP16.03■□□□□ 0.16
CSHL1-208ENST00000558609 SLC41A1Q8IVJ1 513 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 OR2T3Q8NH03 318 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 CEP76Q8TAP6 659 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 RNF34Q969K3 372 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 FBRSQ9HAH7 460 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 WSB2Q9NYS7 404 aaPredicted RBP16.03■□□□□ 0.16
CSHL1-208ENST00000558609 RRN3Q9NYV6 651 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 SUN2Q9UH99 717 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 LIMA1Q9UHB6 759 aaKnown RBP16.03■□□□□ 0.16
CSHL1-208ENST00000558609 DAAM1Q9Y4D1 1078 aa16.03■□□□□ 0.16
CSHL1-208ENST00000558609 MUC22E2RYF6 1773 aaPredicted RBP16.03■□□□□ 0.16
CSHL1-208ENST00000558609 LRRC10BA6NIK2 292 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 C4orf47A7E2U8 309 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 F5H5T6 163 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 CDX4O14627 284 aaPredicted RBP16.02■□□□□ 0.16
CSHL1-208ENST00000558609 ACADMP11310 421 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 CSKP41240 450 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 KLK7P49862 253 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 COPB1P53618 953 aaKnown RBP16.02■□□□□ 0.16
CSHL1-208ENST00000558609 DUOXA1Q1HG43 343 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 TTC39BQ5VTQ0 682 aaPredicted RBP16.02■□□□□ 0.16
CSHL1-208ENST00000558609 TAF3Q5VWG9 929 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 RABEPKQ7Z6M1 372 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 ERICH1Q86X53 443 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 ZNF677Q86XU0 584 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 XYLT1Q86Y38 959 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 KDM1BQ8NB78 822 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 ANKRD20A12PQ8NF67 263 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 EPS8L1Q8TE68 723 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 FOXJ1Q92949 421 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 NT5C3BQ969T7 300 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 TOE1Q96GM8 510 aaKnown RBP16.02■□□□□ 0.16
CSHL1-208ENST00000558609 MYO19Q96H55 970 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 NPY6RQ99463 290 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 NUSAP1Q9BXS6 441 aaKnown RBP16.02■□□□□ 0.16
CSHL1-208ENST00000558609 TMEM9BQ9NQ34 198 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 PRSS16Q9NQE7 514 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 TMEM51Q9NW97 253 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 KIAA1522Q9P206 1035 aaPredicted RBP16.02■□□□□ 0.16
CSHL1-208ENST00000558609 SIK3Q9Y2K2 1263 aa16.02■□□□□ 0.16
CSHL1-208ENST00000558609 ATXN2Q99700 1313 aaKnown RBP16.01■□□□□ 0.15
CSHL1-208ENST00000558609 SYNJ2BP-COX16A0A087WUM0 186 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 H0Y626 953 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 M0QYT0 321 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 MMEP08473 750 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 ZNF18P17022 549 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 JAM2P57087 298 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 POLR2FP61218 127 aaKnown RBP16.01■□□□□ 0.15
CSHL1-208ENST00000558609 ST8SIA6P61647 398 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 NME3Q13232 169 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 ARID5BQ14865 1188 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 NCAPHQ15003 741 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 PITRM1Q5JRX3 1037 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 RABGAP1LQ5R372 815 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 MMS22LQ6ZRQ5 1243 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 ZNF366Q8N895 744 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 CADM4Q8NFZ8 388 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 PGAP3Q96FM1 320 aaPredicted RBP16.01■□□□□ 0.15
CSHL1-208ENST00000558609 MRGPRX3Q96LB0 322 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 HSPA12BQ96MM6 686 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 NUP58Q9BVL2 599 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 FAM207AQ9NSI2 230 aaPredicted RBP16.01■□□□□ 0.15
CSHL1-208ENST00000558609 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.01■□□□□ 0.15
CSHL1-208ENST00000558609 COX16Q9P0S2 106 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 NOCTQ9UK39 431 aaKnown RBP16.01■□□□□ 0.15
CSHL1-208ENST00000558609 SLC6A14Q9UN76 642 aa16.01■□□□□ 0.15
CSHL1-208ENST00000558609 LGALS16A8MUM7 142 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 EPHB6O15197 1021 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 GFPT2O94808 682 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 MOCS3O95396 460 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 SRPRAP08240 638 aaKnown RBP16■□□□□ 0.15
CSHL1-208ENST00000558609 SERPINF2P08697 491 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 SOX5P35711 763 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 CXCR3P49682 368 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 PLK1P53350 603 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 RNASE9P60153 205 aaKnown RBP16■□□□□ 0.15
CSHL1-208ENST00000558609 NOMO3P69849 1222 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 ZBTB16Q05516 673 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 SLC12A1Q13621 1099 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 PLEKHG6Q3KR16 790 aa16■□□□□ 0.15
CSHL1-208ENST00000558609 WDR45BQ5MNZ6 344 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms