RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 NCBP2-AS2Q69YL0 99 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 CHST9Q7L1S5 443 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 NLRP14Q86W24 1093 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 LRRC49Q8IUZ0 686 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 ZDHHC14Q8IZN3 488 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 RTL3Q8N8U3 475 aaKnown RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 CCDC26Q8TAB7 109 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 ZSCAN18Q8TBC5 510 aaPredicted RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 GRK7Q8WTQ7 553 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 SMARCD2Q92925 531 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 NKD2Q969F2 451 aaPredicted RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 ZSWIM3Q96MP5 696 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 ASB16Q96NS5 453 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 AP1M1Q9BXS5 423 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 RBM12Q9NTZ6 932 aaKnown RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 TMEM248Q9NWD8 314 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 PCYOX1Q9UHG3 505 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 CD207Q9UJ71 328 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 VANGL2Q9ULK5 521 aa15.33■□□□□ 0.04
VPS18-202ENST00000558474 DRG1Q9Y295 367 aaKnown RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 PRRC2BQ5JSZ5 2229 aaKnown RBP15.33■□□□□ 0.04
VPS18-202ENST00000558474 HACD1B0YJ81 288 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 CLDN11O75508 207 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 MX2P20592 715 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 SLC6A4P31645 630 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 CDH4P55283 916 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 OTUD4Q01804 1114 aaKnown RBP15.32■□□□□ 0.04
VPS18-202ENST00000558474 ZNF33AQ06730 810 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 DHX34Q14147 1143 aaKnown RBP15.32■□□□□ 0.04
VPS18-202ENST00000558474 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 RWDD4Q6NW29 188 aaKnown RBP15.32■□□□□ 0.04
VPS18-202ENST00000558474 GET4Q7L5D6 327 aaPredicted RBP15.32■□□□□ 0.04
VPS18-202ENST00000558474 MAATS1Q7Z4T9 603 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 ADAT2Q7Z6V5 191 aaKnown RBP15.32■□□□□ 0.04
VPS18-202ENST00000558474 C14orf80Q86SX3 495 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 LGI2Q8N0V4 545 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 HJURPQ8NCD3 748 aaPredicted RBP15.32■□□□□ 0.04
VPS18-202ENST00000558474 ACTL9Q8TC94 416 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 ING5Q8WYH8 240 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 SUSD6Q92537 303 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 SLCO2A1Q92959 643 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 MAGOHBQ96A72 148 aaKnown RBP15.32■□□□□ 0.04
VPS18-202ENST00000558474 HAUS1Q96CS2 278 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 RPRD1AQ96P16 312 aaPredicted RBP15.32■□□□□ 0.04
VPS18-202ENST00000558474 CDX2Q99626 313 aaPredicted RBP15.32■□□□□ 0.04
VPS18-202ENST00000558474 SMARCAL1Q9NZC9 954 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 SNX10Q9Y5X0 201 aa15.32■□□□□ 0.04
VPS18-202ENST00000558474 CFAP69A5D8W1 941 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 MCF2LO15068 1137 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 LIASO43766 372 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 PRAMEF12O95522 483 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 ITGAVP06756 1048 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 COILP38432 576 aaPredicted RBP15.31■□□□□ 0.04
VPS18-202ENST00000558474 NDST2P52849 883 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 YBEYP58557 167 aaPredicted RBP15.31■□□□□ 0.04
VPS18-202ENST00000558474 DYNLT1P63172 113 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 BYSLQ13895 437 aaKnown RBP15.31■□□□□ 0.04
VPS18-202ENST00000558474 CBX2Q14781 532 aaPredicted RBP15.31■□□□□ 0.04
VPS18-202ENST00000558474 PDK1Q15118 436 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 MPPE1Q53F39 396 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 HABP4Q5JVS0 413 aaKnown RBP15.31■□□□□ 0.04
VPS18-202ENST00000558474 CCDC137Q6PK04 289 aaKnown RBP15.31■□□□□ 0.04
VPS18-202ENST00000558474 UMODL1-AS1Q8N2C9 162 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 ZNF557Q8N988 423 aaPredicted RBP15.31■□□□□ 0.04
VPS18-202ENST00000558474 ATL2Q8NHH9 583 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 SLC35B2Q8TB61 432 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 IGSF8Q969P0 613 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 WBP2Q969T9 261 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 FAM161BQ96MY7 647 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 OLFM3Q96PB7 478 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 APOL5Q9BWW9 433 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 DTLQ9NZJ0 730 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 CCL26Q9Y258 94 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 NR2E1Q9Y466 385 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 KIF26AQ9ULI4 1882 aaPredicted RBP15.31■□□□□ 0.04
VPS18-202ENST00000558474 TRIOBPQ9H2D6 2365 aa15.31■□□□□ 0.04
VPS18-202ENST00000558474 GOLGA6L7A0A1B0GV03 622 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 A0A1B0GVM2 712 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 TCAF2A6NFQ2 919 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 PPP1R12AO14974 1030 aaPredicted RBP15.3■□□□□ 0.04
VPS18-202ENST00000558474 CYBBP04839 570 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 STIP1P31948 543 aaKnown RBP15.3■□□□□ 0.04
VPS18-202ENST00000558474 VCPP55072 806 aaKnown RBP15.3■□□□□ 0.04
VPS18-202ENST00000558474 LLGL1Q15334 1064 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 OASLQ15646 514 aaKnown RBP15.3■□□□□ 0.04
VPS18-202ENST00000558474 FAM78AQ5JUQ0 283 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 AFMIDQ63HM1 303 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 RNF43Q68DV7 783 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 POTEHQ6S545 545 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 ZNF783Q6ZMS7 281 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 EP400NLQ6ZTU2 488 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 SYDE1Q6ZW31 735 aaPredicted RBP15.3■□□□□ 0.04
VPS18-202ENST00000558474 SETD3Q86TU7 594 aaPredicted RBP15.3■□□□□ 0.04
VPS18-202ENST00000558474 BBS7Q8IWZ6 715 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 BPIFB1Q8TDL5 484 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 TMA16Q96EY4 203 aaKnown RBP15.3■□□□□ 0.04
VPS18-202ENST00000558474 FERMT1Q9BQL6 677 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 ZFP14Q9HCL3 533 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 ETNK2Q9NVF9 386 aa15.3■□□□□ 0.04
VPS18-202ENST00000558474 ZNF212Q9UDV6 495 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms