RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 GLUD2P49448 558 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 SLC18A1P54219 525 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 TRIM71Q2Q1W2 868 aaKnown RBP10.84□□□□□ -0.67
TPM1-210ENST00000558264 ARL13BQ3SXY8 428 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 ZNF449Q6P9G9 518 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 BZW1Q7L1Q6 419 aaKnown RBP10.84□□□□□ -0.67
TPM1-210ENST00000558264 CEP57Q86XR8 500 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 SPATA2LQ8IUW3 424 aaPredicted RBP10.84□□□□□ -0.67
TPM1-210ENST00000558264 PSTKQ8IV42 348 aaKnown RBP10.84□□□□□ -0.67
TPM1-210ENST00000558264 NDUFAF2Q8N183 169 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 TMEM237Q96Q45 408 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 FRMD8Q9BZ67 464 aaPredicted RBP10.84□□□□□ -0.67
TPM1-210ENST00000558264 RXFP1Q9HBX9 757 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 CSNK1G1Q9HCP0 422 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 KLC4Q9NSK0 619 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 STK38LQ9Y2H1 464 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 SHROOM3Q8TF72 1996 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 SDR42E2A6NKP2 422 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 FAM159BA6NKW6 160 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 TM9SF1O15321 606 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 ATP9BO43861 1147 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 NFKB1P19838 968 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 TARSP26639 723 aaKnown RBP10.84□□□□□ -0.67
TPM1-210ENST00000558264 GRK4P32298 578 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 RAB27AP51159 221 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 ARPP19P56211 112 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 SP3Q02447 781 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 YWHAHQ04917 246 aaPredicted RBP10.84□□□□□ -0.67
TPM1-210ENST00000558264 PPP2R5DQ14738 602 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 CRYMQ14894 314 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 DDR2Q16832 855 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 GALNTL6Q49A17 601 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 CLLU1OSQ5K130 101 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 C16orf46Q6P387 395 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 TTC9BQ8N6N2 239 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 DNAAF3Q8N9W5 541 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 C10orf82Q8WW14 230 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 LINC01599Q8WXQ3 324 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 AZIN2Q96A70 460 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 PKMYT1Q99640 499 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 SSU72Q9NP77 194 aaKnown RBP10.84□□□□□ -0.67
TPM1-210ENST00000558264 TDRD15B5MCY1 1934 aaKnown RBP10.84□□□□□ -0.67
TPM1-210ENST00000558264 A8MUI8 341 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 C9IYK1 514 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 GOLGA8TH3BQL2 631 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 TRPA1O75762 1119 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 DNAJC8O75937 253 aaPredicted RBP10.83□□□□□ -0.68
TPM1-210ENST00000558264 JCHAINP01591 159 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 ATXN8OSP0DMR3 200 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 CD68P34810 354 aaPredicted RBP10.83□□□□□ -0.68
TPM1-210ENST00000558264 PBX3P40426 434 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 SERPINB4P48594 390 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 CXCR3P49682 368 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 GATMP50440 423 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 SARNPP82979 210 aaKnown RBP10.83□□□□□ -0.68
TPM1-210ENST00000558264 TSPY1Q01534 308 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 SLC18A2Q05940 514 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 BNIP1Q12981 228 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 PARP6Q2NL67 630 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 CERCAMQ5T4B2 595 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 CES4AQ5XG92 561 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 LRRC8BQ6P9F7 803 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 C4orf22Q6V702 233 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 ZCCHC23Q6ZST2 131 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 OTOP3Q7RTS5 596 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 KDELC2Q7Z4H8 507 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 CASP10Q92851 521 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 NTAN1Q96AB6 310 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 ALKBH8Q96BT7 664 aaKnown RBP10.83□□□□□ -0.68
TPM1-210ENST00000558264 LRRC39Q96DD0 335 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 NMUR1Q9HB89 426 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 CD248Q9HCU0 757 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 NDFIP2Q9NV92 336 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 RPS6KL1Q9Y6S9 549 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 LAMA2P24043 3122 aaKnown RBP10.83□□□□□ -0.68
TPM1-210ENST00000558264 M0QZQ0 153 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 TRDMT1O14717 391 aaKnown RBP10.83□□□□□ -0.68
TPM1-210ENST00000558264 RNF43Q68DV7 783 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 RGS9BPQ6ZS82 235 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 RPAINQ86UA6 219 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 ZNF598Q86UK7 904 aaKnown RBP10.83□□□□□ -0.68
TPM1-210ENST00000558264 THEM5Q8N1Q8 247 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 GRAMD1AQ96CP6 724 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 KLHL29Q96CT2 875 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 FCRL3Q96P31 734 aaPredicted RBP10.83□□□□□ -0.68
TPM1-210ENST00000558264 SLC9A7Q96T83 725 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 EPAS1Q99814 870 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 TSSK1BQ9BXA7 367 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 KANSL3Q9P2N6 904 aa10.83□□□□□ -0.68
TPM1-210ENST00000558264 MARCOQ9UEW3 520 aaPredicted RBP10.83□□□□□ -0.68
TPM1-210ENST00000558264 KRT38O76015 456 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 CBX6O95503 412 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 FAM163BP0C2L3 166 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 KITP10721 976 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 ALADP13716 330 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 GARSP41250 739 aaKnown RBP10.82□□□□□ -0.68
TPM1-210ENST00000558264 PGGT1BP53609 377 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 ELF3P78545 371 aaPredicted RBP10.82□□□□□ -0.68
TPM1-210ENST00000558264 SCAPQ12770 1279 aa10.82□□□□□ -0.68
TPM1-210ENST00000558264 BTBD8Q5XKL5 378 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms