RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 NEFLP07196 543 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D3HP0C7X1 549 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PABPC1P11940 636 aaKnown RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 GOT1P17174 413 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 HOXD9P28356 352 aaPredicted RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 RBMS1P29558 406 aaKnown RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 SLC8A1P32418 973 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 HOXD13P35453 343 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 NUDT1P36639 197 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 DUSP3P51452 185 aaPredicted RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 INHBCP55103 352 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 NXPH1P58417 271 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 GABREP78334 506 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 ASIC1P78348 528 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PRR20EP86478 221 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PRR20CP86479 221 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PRR20DP86480 221 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PRR20BP86481 221 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PRR20AP86496 221 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 SRSF1Q07955 248 aaKnown RBP eCLIP5.4□□□□□ -1.54
SPG11-208ENST00000558155 OVGP1Q12889 678 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 STAT4Q14765 748 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TRIP4Q15650 581 aaPredicted RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 ADGRF1Q5T601 910 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 SFMBT2Q5VUG0 894 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D3GQ6DHY5 549 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D3CQ6IPX1 549 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 SCARA5Q6ZMJ2 495 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 SND1Q7KZF4 910 aaKnown RBP eCLIP5.4□□□□□ -1.54
SPG11-208ENST00000558155 GPRIN1Q7Z2K8 1008 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PRICKLE2Q7Z3G6 844 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 KIAA0907Q7Z7F0 614 aaPredicted RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 ADIPOR2Q86V24 386 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 IQCHQ86VS3 1027 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 CCDC117Q8IWD4 279 aaPredicted RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 FAM217AQ8IXS0 508 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TBC1D3Q8IZP1 549 aaPredicted RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.4□□□□□ -1.54
SPG11-208ENST00000558155 OR14C36Q8NHC7 312 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PARD3BQ8TEW8 1205 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 TTC9Q92623 222 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PLD4Q96BZ4 506 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 GRAMD1AQ96CP6 724 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 NT5C1AQ9BXI3 368 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 UBXN6Q9BZV1 441 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 SDCBP2Q9H190 292 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 POLR1BQ9H9Y6 1135 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 EBF2Q9HAK2 575 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 CYP3A43Q9HB55 503 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 AGPAT3Q9NRZ7 376 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 OLA1Q9NTK5 396 aaKnown RBP5.4□□□□□ -1.54
SPG11-208ENST00000558155 ABCB8Q9NUT2 735 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 EVA1BQ9NVM1 165 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 GGA2Q9UJY4 613 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 FZD4Q9ULV1 537 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 SMC3Q9UQE7 1217 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 USP3Q9Y6I4 520 aa5.4□□□□□ -1.54
SPG11-208ENST00000558155 PLXNA2O75051 1894 aa5.4□□□□□ -1.55
SPG11-208ENST00000558155 ZNF462Q96JM2 2506 aa5.4□□□□□ -1.55
SPG11-208ENST00000558155 ITPR1Q14643 2758 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 A0A1W2PP55 124 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 K7ENP7 123 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 TRIM38O00635 465 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 WNT9AO14904 365 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 MID1O15344 667 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 SIGLEC6O43699 453 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 OPA1O60313 960 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 SIN3BO75182 1162 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 VNN1O95497 513 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 LATS1O95835 1130 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 ASLP04424 464 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 SFTPCP11686 197 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 C5AR1P21730 350 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 NNMTP40261 264 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 CASP4P49662 377 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 SLC8A3P57103 927 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 YWHAGP61981 247 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPG11-208ENST00000558155 CLDN10P78369 228 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 KCNJ12Q14500 433 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 CST6Q15828 149 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 KNOP1Q1ED39 458 aaKnown RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 HNRNPA1L2Q32P51 320 aaKnown RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 COLEC12Q5KU26 742 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 FAM26FQ5R3K3 315 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 MPP7Q5T2T1 576 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 CDCP2Q5VXM1 449 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 NAPEPLDQ6IQ20 393 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 INO80CQ6PI98 192 aaPredicted RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 ZNF574Q6ZN55 896 aaPredicted RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 CCDC81Q6ZN84 652 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 ATG14Q6ZNE5 492 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 EPM2AIP1Q7L775 607 aaPredicted RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 KANSL1Q7Z3B3 1105 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 MMAAQ8IVH4 418 aaKnown RBP5.39□□□□□ -1.55
SPG11-208ENST00000558155 NELFCDQ8IXH7 590 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 C12orf56Q8IXR9 622 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 KDM1BQ8NB78 822 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 GOLGA5Q8TBA6 731 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 RNF139Q8WU17 664 aa5.39□□□□□ -1.55
SPG11-208ENST00000558155 UBE2Q2Q8WVN8 375 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms