RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 PTPN9P43378 593 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 KIR2DL1P43626 348 aaPredicted RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 CXCR3P49682 368 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 OXCT1P55809 520 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 GSCP56915 257 aaPredicted RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 DMWDQ09019 674 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 LMAN2Q12907 356 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 PTP4A2Q12974 167 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 AUHQ13825 339 aaKnown RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 SIM2Q14190 667 aaPredicted RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 CRY1Q16526 586 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 LPAL2Q16609 132 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 EFHC2Q5JST6 749 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 ACBD5Q5T8D3 534 aaPredicted RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 TRNP1Q6NT89 227 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 FBXL22Q6P050 247 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 WDR59Q6PJI9 974 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 KIAA1324Q6UXG2 1013 aaKnown RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 ARCQ7LC44 396 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 STRADAQ7RTN6 431 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 MAML2Q8IZL2 1156 aaPredicted RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 CCAR2Q8N163 923 aaKnown RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 PHTF2Q8N3S3 785 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 PGAP3Q96FM1 320 aaPredicted RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 SPACA7Q96KW9 195 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 CCDC42Q96M95 316 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 MUC3BQ9H195 1237 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 ABHD10Q9NUJ1 306 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 ELOVL2Q9NXB9 296 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 ARHGEF38Q9NXL2 777 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 CALCOCO1Q9P1Z2 691 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 KIAA1522Q9P206 1035 aaPredicted RBP9.27□□□□□ -0.93
SPG11-207ENST00000558138 NCDNQ9UBB6 729 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 RAD54BQ9Y620 910 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 STON1Q9Y6Q2 735 aa9.27□□□□□ -0.93
SPG11-207ENST00000558138 CACNA1IQ9P0X4 2223 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 A0A0A0MRY4 1105 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 C2CD4BA6NLJ0 364 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 GOLGA6L6A8MZA4 724 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 E9PAM4 449 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 NPC1O15118 1278 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 MAP3K13O43283 966 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 CLDN11O75508 207 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 RPP40O75818 363 aaKnown RBP9.26□□□□□ -0.93
SPG11-207ENST00000558138 PAPSS2O95340 614 aaPredicted RBP9.26□□□□□ -0.93
SPG11-207ENST00000558138 LMNAP02545 664 aaKnown RBP9.26□□□□□ -0.93
SPG11-207ENST00000558138 RHOCP08134 193 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 ACADMP11310 421 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 OR1E1P30953 314 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 CSKP41240 450 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 NBL1P41271 181 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 ZNF143P52747 638 aaPredicted RBP9.26□□□□□ -0.93
SPG11-207ENST00000558138 RPL7AP62424 266 aaKnown RBP9.26□□□□□ -0.93
SPG11-207ENST00000558138 SRSF5Q13243 272 aaKnown RBP9.26□□□□□ -0.93
SPG11-207ENST00000558138 MAMLD1Q13495 774 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 ZNF234Q14588 700 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 USP39Q53GS9 565 aaKnown RBP9.26□□□□□ -0.93
SPG11-207ENST00000558138 PITRM1Q5JRX3 1037 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 SH3PXD2AQ5TCZ1 1133 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 OTUD1Q5VV17 481 aaPredicted RBP9.26□□□□□ -0.93
SPG11-207ENST00000558138 ALKBH5Q6P6C2 394 aaKnown RBP9.26□□□□□ -0.93
SPG11-207ENST00000558138 SARM1Q6SZW1 724 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 MAMSTRQ6ZN01 415 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 TFAP2DQ7Z6R9 452 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 SLFN11Q7Z7L1 901 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 WDR5BQ86VZ2 330 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 CACUL1Q86Y37 369 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 FIBINQ8TAL6 211 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 WFDC5Q8TCV5 224 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 IGSF8Q969P0 613 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 MYEOVQ96EZ4 313 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 HAPLN3Q96S86 360 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 ACOX2Q99424 681 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 PHOX2BQ99453 314 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 CNPY3Q9BT09 278 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 SLC25A13Q9UJS0 675 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 VPS28Q9UK41 221 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 FBXO10Q9UK96 956 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 GMEB2Q9UKD1 530 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 INVSQ9Y283 1065 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 STARD13Q9Y3M8 1113 aa9.26□□□□□ -0.93
SPG11-207ENST00000558138 A0A087X0T9 212 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 WASH3PC4AMC7 463 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 GFRA2O00451 464 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 DAPK3O43293 454 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 CREB3O43889 395 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 PRPSAP2O60256 369 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 GFRA3O60609 400 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 ASLP04424 464 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 DLDP09622 509 aaKnown RBP9.25□□□□□ -0.93
SPG11-207ENST00000558138 FAM228BP0C875 321 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 HLA-EP13747 358 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 CNR2P34972 360 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 IL12RB1P42701 662 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 ZNF75DP51815 510 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 CDH4P55283 916 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 HDAC4P56524 1084 aa9.25□□□□□ -0.93
SPG11-207ENST00000558138 GFPT1Q06210 699 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms