RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 LUC7L3O95232 432 aaKnown RBP26.36■■□□□ 1.81
SMAD6-202ENST00000557916 PCK1P35558 622 aa26.36■■□□□ 1.81
SMAD6-202ENST00000557916 TNFRSF4P43489 277 aa26.36■■□□□ 1.81
SMAD6-202ENST00000557916 IRAK1P51617 712 aa26.36■■□□□ 1.81
SMAD6-202ENST00000557916 CDH18Q13634 790 aa26.36■■□□□ 1.81
SMAD6-202ENST00000557916 DAB2IPQ5VWQ8 1189 aa26.36■■□□□ 1.81
SMAD6-202ENST00000557916 CCAR2Q8N163 923 aaKnown RBP26.36■■□□□ 1.81
SMAD6-202ENST00000557916 FIBINQ8TAL6 211 aa26.36■■□□□ 1.81
SMAD6-202ENST00000557916 WFDC5Q8TCV5 224 aa26.36■■□□□ 1.81
SMAD6-202ENST00000557916 LCMT1Q9UIC8 334 aa26.36■■□□□ 1.81
SMAD6-202ENST00000557916 KIAA1549LQ6ZVL6 1849 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 A0A1B0GVM2 712 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 TCAF2A6NFQ2 919 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 DRGXA6NNA5 263 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 RNF40O75150 1001 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 HLA-FP30511 346 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 SEC13P55735 322 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 NRG1Q02297 640 aaPredicted RBP26.35■■□□□ 1.81
SMAD6-202ENST00000557916 Q6ZS52 159 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 ACRBPQ8NEB7 543 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 CCDC26Q8TAB7 109 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 CHRDQ9H2X0 955 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 ABCB8Q9NUT2 735 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 USP18Q9UMW8 372 aa26.35■■□□□ 1.81
SMAD6-202ENST00000557916 REXO2Q9Y3B8 237 aaKnown RBP26.35■■□□□ 1.81
SMAD6-202ENST00000557916 IGLV3-10A0A075B6K4 115 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 PRRT4C9JH25 899 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 FAM72CH0Y354 149 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 MTA2O94776 668 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 PROSCO94903 275 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 TCEAL1Q15170 157 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 GEN1Q17RS7 908 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 ERMARDQ5T6L9 678 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 FAM72AQ5TYM5 149 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 FAM72DQ6L9T8 149 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 ANKS1BQ7Z6G8 1248 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 FAM72BQ86X60 149 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 PYROXD2Q8N2H3 581 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 PEBP4Q96S96 227 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 TFR2Q9UP52 801 aa26.34■■□□□ 1.81
SMAD6-202ENST00000557916 CLDN11O75508 207 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 CNTN5O94779 1100 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 CDH4P55283 916 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 KRT83P78385 493 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 ARTNQ5T4W7 220 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 CHST9Q7L1S5 443 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 LRRC8AQ8IWT6 810 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 CCDC112Q8NEF3 446 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 GPATCH2LQ9NWQ4 482 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 MPP6Q9NZW5 540 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 PPARGC1AQ9UBK2 798 aaKnown RBP26.33■■□□□ 1.81
SMAD6-202ENST00000557916 GGA2Q9UJY4 613 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 AP4E1Q9UPM8 1137 aa26.33■■□□□ 1.81
SMAD6-202ENST00000557916 ANTXRLA6NF34 631 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 L1CAMP32004 1257 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 CD70P32970 193 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 GAS6Q14393 721 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 MESDQ14696 234 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 ALFQ53S48 1182 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 C2orf27AQ580R0 203 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 FSCBQ5H9T9 825 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 EMC10Q5UCC4 262 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 MANEALQ5VSG8 457 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.32■■□□□ 1.83e-6■■■■□ 23.9
SMAD6-202ENST00000557916 SNRNP25Q9BV90 132 aaKnown RBP26.32■■□□□ 1.8
SMAD6-202ENST00000557916 ZYG11BQ9C0D3 744 aa26.32■■□□□ 1.8
SMAD6-202ENST00000557916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 TMEM110-MUSTN1A8MSY1 372 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 LRIG2O94898 1065 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 PABPC1P11940 636 aaKnown RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 TCF4P15884 667 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 ARHGAP25P42331 645 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 SSR1P43307 286 aaKnown RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 NOP2P46087 812 aaKnown RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 LMAN2Q12907 356 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 MTAPQ13126 283 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 ZNF177Q13360 481 aaPredicted RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 RWDD4Q6NW29 188 aaKnown RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 CYP4V2Q6ZWL3 525 aaPredicted RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 DTWD2Q8NBA8 298 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 RPLP0P6Q8NHW5 317 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 WFIKKN2Q8TEU8 576 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 USP33Q8TEY7 942 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 LMLNQ96KR4 655 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 DESI2Q9BSY9 194 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 IER2Q9BTL4 223 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 DHX35Q9H5Z1 703 aaKnown RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 ZWILCHQ9H900 591 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 KIAA1522Q9P206 1035 aaPredicted RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 STARD13Q9Y3M8 1113 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 RCCD1A6NED2 376 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 CREB3O43889 395 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 IL1R2P27930 398 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 TIE1P35590 1138 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 KIR2DL1P43626 348 aaPredicted RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 VAV2P52735 878 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 MRPS21P82921 87 aaKnown RBP26.31■■□□□ 1.8
SMAD6-202ENST00000557916 CA9Q16790 459 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 BOLA3Q53S33 107 aa26.31■■□□□ 1.8
SMAD6-202ENST00000557916 KIAA0907Q7Z7F0 614 aaPredicted RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms