RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MUC22E2RYF6 1773 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-235ENST00000557740 SH3BP5O60239 455 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 RNASEH1O60930 286 aaKnown RBP15.15■□□□□ 0.02
SHMT2-235ENST00000557740 LUC7L3O95232 432 aaKnown RBP15.15■□□□□ 0.02
SHMT2-235ENST00000557740 TRUB2O95900 331 aaKnown RBP15.15■□□□□ 0.02
SHMT2-235ENST00000557740 SLC9A1P19634 815 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 ACSL1P33121 698 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 MATKP42679 507 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 MTIF2P46199 727 aaKnown RBP15.15■□□□□ 0.02
SHMT2-235ENST00000557740 FAM193AP78312 1265 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 ZNF423Q2M1K9 1284 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 HNRNPA1L2Q32P51 320 aaKnown RBP15.15■□□□□ 0.02
SHMT2-235ENST00000557740 PITRM1Q5JRX3 1037 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 RNF219Q5W0B1 726 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-235ENST00000557740 RAP1GAP2Q684P5 730 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 TMEM110Q86TL2 294 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 CFAP52Q8N1V2 620 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 ATP6V0D2Q8N8Y2 350 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 LMLNQ96KR4 655 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 BTN2A3PQ96KV6 586 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 NOX5Q96PH1 765 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 GAREM1Q9H706 876 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 SGK2Q9HBY8 427 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 SLC12A6Q9UHW9 1150 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 XPO7Q9UIA9 1087 aaKnown RBP15.15■□□□□ 0.02
SHMT2-235ENST00000557740 NCKAP1Q9Y2A7 1128 aa15.15■□□□□ 0.02
SHMT2-235ENST00000557740 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-235ENST00000557740 GTPBP10A4D1E9 387 aaKnown RBP15.14■□□□□ 0.01
SHMT2-235ENST00000557740 TMEM8BA6NDV4 472 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 BECN2A8MW95 431 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 F5H5T6 163 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 FSBPO95073 299 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 SLC2A3P11169 496 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 ABCB4P21439 1286 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 TACR2P21452 398 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 AFF3P51826 1226 aaKnown RBP15.14■□□□□ 0.01
SHMT2-235ENST00000557740 CDK17Q00537 523 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 APBA1Q02410 837 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 SFSWAPQ12872 951 aaKnown RBP15.14■□□□□ 0.01
SHMT2-235ENST00000557740 TEAD4Q15561 434 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 TRIP6Q15654 476 aaKnown RBP15.14■□□□□ 0.01
SHMT2-235ENST00000557740 MMS22LQ6ZRQ5 1243 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 PASD1Q8IV76 773 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 MLKLQ8NB16 471 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 SHC3Q92529 594 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 RNF34Q969K3 372 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 CAMK1GQ96NX5 476 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 RSPH9Q9H1X1 276 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-235ENST00000557740 PABPC3Q9H361 631 aaKnown RBP15.14■□□□□ 0.01
SHMT2-235ENST00000557740 MTG2Q9H4K7 406 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 KIAA1522Q9P206 1035 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-235ENST00000557740 INTS6Q9UL03 887 aaKnown RBP15.14■□□□□ 0.01
SHMT2-235ENST00000557740 SCML1Q9UN30 329 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 NEUROG3Q9Y4Z2 214 aa15.14■□□□□ 0.01
SHMT2-235ENST00000557740 ADAMTS9Q9P2N4 1935 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 PCNX2A6NKB5 2137 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 SYNJ2BP-COX16A0A087WUM0 186 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 A0A1B0GVT2 93 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 SIN3BO75182 1162 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 IGLV3-25P01717 112 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 C7P10643 843 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 CSNK1EP49674 416 aaKnown RBP15.13■□□□□ 0.01
SHMT2-235ENST00000557740 SNX16P57768 344 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 ECT2LQ008S8 904 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 PTK2Q05397 1052 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 HLA-BQ31612 363 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 FSCBQ5H9T9 825 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 RABGAP1LQ5R372 815 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 USP30Q70CQ3 517 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 DHX40Q8IX18 779 aaKnown RBP15.13■□□□□ 0.01
SHMT2-235ENST00000557740 KDM1BQ8NB78 822 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 C1orf216Q8TAB5 229 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 GATA6Q92908 595 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 MYO19Q96H55 970 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 PPP1R13BQ96KQ4 1090 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 MRGPRX3Q96LB0 322 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 CPXM1Q96SM3 734 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 SYNCQ9H7C4 482 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 IL21RQ9HBE5 538 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.13■□□□□ 0.01
SHMT2-235ENST00000557740 ASNSD1Q9NWL6 643 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 DDIT4Q9NX09 232 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 COX16Q9P0S2 106 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 KLK13Q9UKR3 277 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 ERVW-1Q9UQF0 538 aa15.13■□□□□ 0.01
SHMT2-235ENST00000557740 FNDC3AQ9Y2H6 1198 aaKnown RBP15.13■□□□□ 0.01
SHMT2-235ENST00000557740 EDDM13A0A1B0GTR0 161 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 FAM47DPA6NHR8 397 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 TTC34A8MYJ7 566 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 KCNU1A8MYU2 1149 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 HSF2BPO75031 334 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 GLI1P08151 1106 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 SRPRAP08240 638 aaKnown RBP15.12■□□□□ 0.01
SHMT2-235ENST00000557740 ZNF883P0CG24 379 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 PON1P27169 355 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 CCR1P32246 355 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 CTSOP43234 321 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-235ENST00000557740 PITX1P78337 314 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-235ENST00000557740 BNC1Q01954 994 aa15.12■□□□□ 0.01
SHMT2-235ENST00000557740 ARID5BQ14865 1188 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms