RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 HTR3DQ70Z44 454 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 EPM2AIP1Q7L775 607 aaPredicted RBP8.34□□□□□ -1.07
RD3L-201ENST00000557640 FAM124AQ86V42 546 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 SYCP3Q8IZU3 236 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 ZNF366Q8N895 744 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 PDZD8Q8NEN9 1154 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 JAKMIP2Q96AA8 810 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 TWNKQ96RR1 684 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 SNX25Q9H3E2 840 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 FAM124BQ9H5Z6 455 aaPredicted RBP8.34□□□□□ -1.07
RD3L-201ENST00000557640 PRORYQ9H606 182 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 C6orf106Q9H6K1 298 aaPredicted RBP8.34□□□□□ -1.07
RD3L-201ENST00000557640 GDPD2Q9HCC8 539 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 DMAP1Q9NPF5 467 aaPredicted RBP8.34□□□□□ -1.07
RD3L-201ENST00000557640 FAM49BQ9NUQ9 324 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 FRRS1LQ9P0K9 344 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 KIAA1522Q9P206 1035 aaPredicted RBP8.34□□□□□ -1.07
RD3L-201ENST00000557640 FBXO10Q9UK96 956 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 EXOC7Q9UPT5 735 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 BOD1L1Q8NFC6 3051 aa8.34□□□□□ -1.07
RD3L-201ENST00000557640 A0A1W2PQH9 124 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 METTL12A8MUP2 240 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 H0Y8X5 98 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 PYCARD-AS1I3L0S3 204 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 BCAT2O15382 392 aaPredicted RBP8.33□□□□□ -1.08
RD3L-201ENST00000557640 GSC2O15499 205 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 FLRT2O43155 660 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 STC2O76061 302 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 CER1O95813 267 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 IGLV1-40P01703 118 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 HLA-EP13747 358 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 ACO1P21399 889 aaKnown RBP8.33□□□□□ -1.08
RD3L-201ENST00000557640 ACSL1P33121 698 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 RDXP35241 583 aaKnown RBP8.33□□□□□ -1.08
RD3L-201ENST00000557640 ABCG1P45844 678 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 CYP2J2P51589 502 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 PLAURQ03405 335 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 NCOA4Q13772 614 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 ZNF234Q14588 700 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 PSMD6Q15008 389 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 SNRNP35Q16560 246 aaKnown RBP8.33□□□□□ -1.08
RD3L-201ENST00000557640 HIF1AQ16665 826 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 DUOXA2Q1HG44 320 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 WDR45BQ5MNZ6 344 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 SYCP2LQ5T4T6 812 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 SCD5Q86SK9 330 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 ACOT1Q86TX2 421 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 ZC3H3Q8IXZ2 948 aaKnown RBP8.33□□□□□ -1.08
RD3L-201ENST00000557640 ZNF843Q8N446 348 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 C12orf29Q8N999 325 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 SCFD1Q8WVM8 642 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 CCDC127Q96BQ5 260 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 PIWIL1Q96J94 861 aaKnown RBP8.33□□□□□ -1.08
RD3L-201ENST00000557640 UBL7Q96S82 380 aaPredicted RBP8.33□□□□□ -1.08
RD3L-201ENST00000557640 COL12A1Q99715 3063 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 ZDHHC5Q9C0B5 715 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 ITM2CQ9NQX7 267 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 AGPAT3Q9NRZ7 376 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 PANK4Q9NVE7 773 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 THAP10Q9P2Z0 257 aaPredicted RBP8.33□□□□□ -1.08
RD3L-201ENST00000557640 NFE2L3Q9Y4A8 694 aa8.33□□□□□ -1.08
RD3L-201ENST00000557640 ZNF233A6NK53 670 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 H3BQV1 296 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 GFRA2O00451 464 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 CLIC2O15247 247 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 GNSP15586 552 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 CASP1P29466 404 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 MAP3K7CLP57077 242 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 TNNC1P63316 161 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 DNAJC3Q13217 504 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 SHBQ15464 509 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 RRAGBQ5VZM2 374 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 LARP1BQ659C4 914 aaKnown RBP8.32□□□□□ -1.08
RD3L-201ENST00000557640 SPOPLQ6IQ16 392 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 CLEC20AQ6ZU45 233 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 TMPRSS6Q8IU80 811 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 CADM4Q8NFZ8 388 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 SLC2A14Q8TDB8 520 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 SNX19Q92543 992 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 SMARCD1Q96GM5 515 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 IPO9Q96P70 1041 aaKnown RBP8.32□□□□□ -1.08
RD3L-201ENST00000557640 MED10Q9BTT4 135 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 PANK2Q9BZ23 570 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
RD3L-201ENST00000557640 CAAP1Q9H8G2 361 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 CSNK1G1Q9HCP0 422 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 TM9SF3Q9HD45 589 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.32□□□□□ -1.08
RD3L-201ENST00000557640 EHD2Q9NZN4 543 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 SLC27A6Q9Y2P4 619 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.32□□□□□ -1.08
RD3L-201ENST00000557640 PCDHGB2Q9Y5G2 931 aa8.32□□□□□ -1.08
RD3L-201ENST00000557640 SPENQ96T58 3664 aaKnown RBP8.31□□□□□ -1.08
RD3L-201ENST00000557640 LRRIQ3A6PVS8 624 aaPredicted RBP8.31□□□□□ -1.08
RD3L-201ENST00000557640 WNT1P04628 370 aa8.31□□□□□ -1.08
RD3L-201ENST00000557640 TNNI1P19237 187 aa8.31□□□□□ -1.08
RD3L-201ENST00000557640 ADORA2BP29275 332 aa8.31□□□□□ -1.08
RD3L-201ENST00000557640 EIF2S3P41091 472 aaKnown RBP8.31□□□□□ -1.08
RD3L-201ENST00000557640 CTSKP43235 329 aa8.31□□□□□ -1.08
RD3L-201ENST00000557640 ASPAP45381 313 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms