RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 POLD4Q9HCU8 107 aa7.19□□□□□ -1.26
SPTLC2-206ENST00000557566 TRPM5Q9NZQ8 1165 aa7.19□□□□□ -1.26
SPTLC2-206ENST00000557566 IFNKQ9P0W0 207 aa7.19□□□□□ -1.26
SPTLC2-206ENST00000557566 ARHGAP28Q9P2N2 729 aa7.19□□□□□ -1.26
SPTLC2-206ENST00000557566 PCDHA7Q9UN72 937 aa7.19□□□□□ -1.26
SPTLC2-206ENST00000557566 KCNJ14Q9UNX9 436 aa7.19□□□□□ -1.26
SPTLC2-206ENST00000557566 RAD54BQ9Y620 910 aa7.19□□□□□ -1.26
SPTLC2-206ENST00000557566 CPQQ9Y646 472 aa7.19□□□□□ -1.26
SPTLC2-206ENST00000557566 NBASA2RRP1 2371 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 ANO9A1A5B4 782 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 LACTBL1A8MY62 500 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 K7ENP7 123 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 GFRA2O00451 464 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 KCNK3O14649 394 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 CPLX1O14810 134 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 SCAMP3O14828 347 aaKnown RBP7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 CLDN3O15551 220 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 HOXC11O43248 304 aaPredicted RBP7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 SUV39H1O43463 412 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 PPP6R2O75170 966 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 MED24O75448 989 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 ERLIN1O75477 346 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 SMC2O95347 1197 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 CTDNEP1O95476 244 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 XBP1P17861 261 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 NFKB1P19838 968 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 CYP2F1P24903 491 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 TPMTP51580 245 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 MYL5Q02045 173 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 TBX2Q13207 712 aaPredicted RBP7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 ORC1Q13415 861 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 ILKQ13418 452 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 SPATA1Q5VX52 437 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 C9orf57Q5W0N0 161 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 WSCD1Q658N2 575 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 GRAMD4Q6IC98 578 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 INO80CQ6PI98 192 aaPredicted RBP7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 ADAT2Q7Z6V5 191 aaKnown RBP7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 DCBLD1Q8N8Z6 715 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 MSANTD4Q8NCY6 345 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 SCFD1Q8WVM8 642 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 GOLGA1Q92805 767 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 AIFM3Q96NN9 605 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 PYM1Q9BRP8 204 aaKnown RBP7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 NUP58Q9BVL2 599 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 BRMS1Q9HCU9 246 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 OSGEPQ9NPF4 335 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 KMT5AQ9NQR1 393 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 ITM2CQ9NQX7 267 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 STARD5Q9NSY2 213 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 TMLHEQ9NVH6 421 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 SMPD4Q9NXE4 827 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 CFAP97Q9P2B7 532 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 MRFAP1Q9Y605 127 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 NUMA1Q14980 2115 aa7.18□□□□□ -1.26
SPTLC2-206ENST00000557566 A0A1B0GTQ1 180 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 ERICH4A6NGS2 130 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 KCNJ18B7U540 433 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 CBX4O00257 560 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 PIRO00625 290 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 SPTLC2O15270 562 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 ITGAVP06756 1048 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 ACADMP11310 421 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 ABCB4P21439 1286 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 RPA1P27694 616 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 OAS2P29728 719 aaKnown RBP7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 PDIA3P30101 505 aaKnown RBP7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 CASQ1P31415 396 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 SOX18P35713 384 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 GRIK1P39086 918 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 CTSKP43235 329 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 TAF6P49848 677 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 ERVPABLB-1P60509 514 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 NFKB2Q00653 900 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 TAGLNQ01995 201 aaKnown RBP7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 MCL1Q07820 350 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 STK3Q13188 491 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 STK38Q15208 465 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 ZSCAN26Q16670 478 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 KYAT1Q16773 422 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 ANO4Q32M45 955 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 DPCR1Q3MIW9 517 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 ZPBP2Q6X784 338 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 KDM7AQ6ZMT4 941 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 SLCO4C1Q6ZQN7 724 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 GATAD2AQ86YP4 633 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 TMEM139Q8IV31 216 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 SCN4BQ8IWT1 228 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 CEP112Q8N8E3 955 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 OR13H1Q8NG92 308 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 ERMNQ8TAM6 284 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 EDARADDQ8WWZ3 215 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 RFFLQ8WZ73 363 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 SIPA1Q96FS4 1042 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 FRMD6Q96NE9 622 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 NAA15Q9BXJ9 866 aaKnown RBP7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 FUT8Q9BYC5 575 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 CCSER1Q9C0I3 900 aa7.17□□□□□ -1.26
SPTLC2-206ENST00000557566 ACBD3Q9H3P7 528 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms