RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TBX4P57082 545 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 MCCD1P59942 119 aaPredicted RBP14.63□□□□□ -0.07
SLIRP-210ENST00000557431 SUZ12Q15022 739 aaKnown RBP14.63□□□□□ -0.07
SLIRP-210ENST00000557431 ANKRD40Q6AI12 368 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 MSANTD2Q6P1R3 559 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 MMAAQ8IVH4 418 aaKnown RBP14.63□□□□□ -0.07
SLIRP-210ENST00000557431 TTC39CQ8N584 583 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 IGSF8Q969P0 613 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 MRGPRX3Q96LB0 322 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 NEUROG2Q9H2A3 272 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 PABPC3Q9H361 631 aaKnown RBP14.63□□□□□ -0.07
SLIRP-210ENST00000557431 SGK2Q9HBY8 427 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 FTSJ1Q9UET6 329 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 PCDHB4Q9Y5E5 795 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 ITPR1Q14643 2758 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 TRPM6Q9BX84 2022 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 SMG1Q96Q15 3661 aaKnown RBP14.62□□□□□ -0.07
SLIRP-210ENST00000557431 KIF26BQ2KJY2 2108 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 TNFSF14O43557 240 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 LTFP02788 710 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 ATP5BP06576 529 aaKnown RBP14.62□□□□□ -0.07
SLIRP-210ENST00000557431 SETSIPP0DME0 302 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 PSMD8P48556 350 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 METAP1P53582 386 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 C21orf59P57076 290 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 KCNJ12Q14500 433 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 SHBQ15464 509 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 ISM2Q6H9L7 571 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 IGSF10Q6WRI0 2623 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 PIP4K2CQ8TBX8 421 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 KCTD13Q8WZ19 329 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 FCRL2Q96LA5 508 aaPredicted RBP14.62□□□□□ -0.07
SLIRP-210ENST00000557431 RSPH9Q9H1X1 276 aaPredicted RBP14.62□□□□□ -0.07
SLIRP-210ENST00000557431 CAAP1Q9H8G2 361 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 CNGB3Q9NQW8 809 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 SUN2Q9UH99 717 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 PTPRQQ9UMZ3 2332 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 COQ4Q9Y3A0 265 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 DOCK4Q8N1I0 1966 aa14.62□□□□□ -0.07
SLIRP-210ENST00000557431 A0A1B0GTQ1 180 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 A0A1W2PPC4 97 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 STX10O60499 249 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 RNASEH2AO75792 299 aaKnown RBP14.61□□□□□ -0.07
SLIRP-210ENST00000557431 LATS1O95835 1130 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 PRB1P04280 392 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 FYNP06241 537 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 VAV1P15498 845 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 ITPKBP27987 946 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 STK19P49842 368 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-210ENST00000557431 ZNF445P59923 1031 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 E2F5Q15329 346 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 CST6Q15828 149 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 LCLAT1Q6UWP7 414 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 CIR1Q86X95 450 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-210ENST00000557431 ARHGEF19Q8IW93 802 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 APCDD1Q8J025 514 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 STK40Q8N2I9 435 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 GALNT15Q8N3T1 639 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 HJURPQ8NCD3 748 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-210ENST00000557431 DQX1Q8TE96 717 aaKnown RBP14.61□□□□□ -0.07
SLIRP-210ENST00000557431 SLC35F5Q8WV83 523 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 SLC35C1Q96A29 364 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 FAXDC2Q96IV6 333 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 RPL10LQ96L21 214 aaKnown RBP14.61□□□□□ -0.07
SLIRP-210ENST00000557431 OSGEPQ9NPF4 335 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 AASDHPPTQ9NRN7 309 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 SLCO3A1Q9UIG8 710 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 ERVW-1Q9UQF0 538 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 NAALADL1Q9UQQ1 740 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 NCKAP1Q9Y2A7 1128 aa14.61□□□□□ -0.07
SLIRP-210ENST00000557431 ENC1O14682 589 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 PCDHGA12O60330 932 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 SLC11A2P49281 568 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 ST8SIA6P61647 398 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 YWHAEP62258 255 aaKnown RBP14.6□□□□□ -0.07
SLIRP-210ENST00000557431 PPP2CBP62714 309 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 RACK1P63244 317 aaKnown RBP14.6□□□□□ -0.07
SLIRP-210ENST00000557431 PPP2CAP67775 309 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 PITX1P78337 314 aaPredicted RBP14.6□□□□□ -0.07
SLIRP-210ENST00000557431 ZBTB16Q05516 673 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 BNIP3Q12983 259 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 SMAD1Q15797 465 aaKnown RBP14.6□□□□□ -0.07
SLIRP-210ENST00000557431 HNRNPA1L2Q32P51 320 aaKnown RBP14.6□□□□□ -0.07
SLIRP-210ENST00000557431 DCAF6Q58WW2 860 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 PITRM1Q5JRX3 1037 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 C9orf64Q5T6V5 341 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 RAP1GAP2Q684P5 730 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 TAC4Q86UU9 113 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 PPM1KQ8N3J5 372 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 AADATQ8N5Z0 425 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 EID2Q8N6I1 236 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 FIBINQ8TAL6 211 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 TTC17Q96AE7 1141 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 CNDP2Q96KP4 475 aaKnown RBP14.6□□□□□ -0.07
SLIRP-210ENST00000557431 TSG101Q99816 390 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 OMDQ99983 421 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 ACE2Q9BYF1 805 aaPredicted RBP14.6□□□□□ -0.07
SLIRP-210ENST00000557431 FBRSQ9HAH7 460 aa14.6□□□□□ -0.07
SLIRP-210ENST00000557431 A0A1W2PQ27 194 aa14.59□□□□□ -0.07
SLIRP-210ENST00000557431 A0A1W2PQ64 194 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms