RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MOCS3O95396 460 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 CER1O95813 267 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 TRUB2O95900 331 aaKnown RBP14.67□□□□□ -0.06
SNX6-210ENST00000557341 CD59P13987 128 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 SPINK2P20155 84 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 ACSL1P33121 698 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 CSKP41240 450 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 RPS14P62263 151 aaKnown RBP14.67□□□□□ -0.06
SNX6-210ENST00000557341 TPD52L1Q16890 204 aaPredicted RBP14.67□□□□□ -0.06
SNX6-210ENST00000557341 DCAF6Q58WW2 860 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 RAP1GAP2Q684P5 730 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 LGI2Q8N0V4 545 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 CFAP52Q8N1V2 620 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 ATP6V0D2Q8N8Y2 350 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 TTC17Q96AE7 1141 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 MYO19Q96H55 970 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 SCNM1Q9BWG6 230 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 BTBD1Q9H0C5 482 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 FAM204AQ9H8W3 233 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 EIF2B4Q9UI10 523 aaKnown RBP14.67□□□□□ -0.06
SNX6-210ENST00000557341 XPO7Q9UIA9 1087 aaKnown RBP14.67□□□□□ -0.06
SNX6-210ENST00000557341 INTS6Q9UL03 887 aaKnown RBP14.67□□□□□ -0.06
SNX6-210ENST00000557341 SCML1Q9UN30 329 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 F5H5T6 163 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 H0Y626 953 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 HSF2BPO75031 334 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 SEMA4FO95754 770 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 TOP3BO95985 862 aaKnown RBP14.66□□□□□ -0.06
SNX6-210ENST00000557341 PROS1P07225 676 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 GLI1P08151 1106 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 TACR2P21452 398 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 PON1P27169 355 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 APBA1Q02410 837 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 PTK2Q05397 1052 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 MAN2A1Q16706 1144 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 HNRNPA1L2Q32P51 320 aaKnown RBP14.66□□□□□ -0.06
SNX6-210ENST00000557341 ZC3H12AQ5D1E8 599 aaKnown RBP14.66□□□□□ -0.06
SNX6-210ENST00000557341 FSCBQ5H9T9 825 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 PITRM1Q5JRX3 1037 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 TTC39BQ5VTQ0 682 aaPredicted RBP14.66□□□□□ -0.06
SNX6-210ENST00000557341 SMYD5Q6GMV2 418 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 IL27RAQ6UWB1 636 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 IRF2BP1Q8IU81 584 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 PASD1Q8IV76 773 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 NAXDQ8IW45 347 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 FAM114A1Q8IWE2 563 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 KDM1BQ8NB78 822 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 NOX5Q96PH1 765 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 CPXM1Q96SM3 734 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 RSPH9Q9H1X1 276 aaPredicted RBP14.66□□□□□ -0.06
SNX6-210ENST00000557341 C6orf106Q9H6K1 298 aaPredicted RBP14.66□□□□□ -0.06
SNX6-210ENST00000557341 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.66□□□□□ -0.062e-7■■□□□ 12.7
SNX6-210ENST00000557341 ASNSD1Q9NWL6 643 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 CHMP5Q9NZZ3 219 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 KIAA1522Q9P206 1035 aaPredicted RBP14.66□□□□□ -0.06
SNX6-210ENST00000557341 SLC12A6Q9UHW9 1150 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 PCDHGC3Q9UN70 934 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.66□□□□□ -0.06
SNX6-210ENST00000557341 CEP83Q9Y592 693 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 CHD6Q8TD26 2715 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 ITIH6Q6UXX5 1313 aa14.66□□□□□ -0.06
SNX6-210ENST00000557341 PLXNB3Q9ULL4 1909 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 KCNU1A8MYU2 1149 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 C1QTNF9BB2RNN3 333 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 RNASEH1O60930 286 aaKnown RBP14.65□□□□□ -0.06
SNX6-210ENST00000557341 SIN3BO75182 1162 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 TRIM16O95361 564 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 SRPRAP08240 638 aaKnown RBP14.65□□□□□ -0.06
SNX6-210ENST00000557341 C1QTNF9P0C862 333 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 SLC2A3P11169 496 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 ABCB4P21439 1286 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 RDXP35241 583 aaKnown RBP14.65□□□□□ -0.06
SNX6-210ENST00000557341 MATKP42679 507 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 AFF3P51826 1226 aaKnown RBP14.65□□□□□ -0.06
SNX6-210ENST00000557341 PITX1P78337 314 aaPredicted RBP14.65□□□□□ -0.06
SNX6-210ENST00000557341 CDK17Q00537 523 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 ARID5BQ14865 1188 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 TAF5Q15542 800 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 EFHC1Q5JVL4 640 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 RNF219Q5W0B1 726 aaPredicted RBP14.65□□□□□ -0.06
SNX6-210ENST00000557341 MMS22LQ6ZRQ5 1243 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 USP30Q70CQ3 517 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 PPP1R13BQ96KQ4 1090 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 MRGPRX3Q96LB0 322 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 SLC2A13Q96QE2 648 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 CLSTN2Q9H4D0 955 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 SGK2Q9HBY8 427 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 DDIT4Q9NX09 232 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 ERVW-1Q9UQF0 538 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 NCKAP1Q9Y2A7 1128 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 NEUROG3Q9Y4Z2 214 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 DOCK9Q9BZ29 2069 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 FREM2Q5SZK8 3169 aa14.65□□□□□ -0.06
SNX6-210ENST00000557341 COL5A1P20908 1838 aaPredicted RBP14.64□□□□□ -0.07
SNX6-210ENST00000557341 KNL1Q8NG31 2342 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 CABIN1Q9Y6J0 2220 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 SYNJ2BP-COX16A0A087WUM0 186 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 HYAL3O43820 417 aaPredicted RBP14.64□□□□□ -0.07
SNX6-210ENST00000557341 SH3BP5O60239 455 aa14.64□□□□□ -0.07
SNX6-210ENST00000557341 ZNF883P0CG24 379 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms