RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 BYSLQ13895 437 aaKnown RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 TAF12Q16514 161 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 CALCRLQ16602 461 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 DNAJC21Q5F1R6 531 aaKnown RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 TRIM68Q6AZZ1 485 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 ARMCX5Q6P1M9 558 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 CCNI2Q6ZMN8 369 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 LPCAT2Q7L5N7 544 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 SLCO6A1Q86UG4 719 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 TAX1BP1Q86VP1 789 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 RASSF3Q86WH2 238 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 CATSPER3Q86XQ3 398 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 CPNE8Q86YQ8 564 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 FMNL3Q8IVF7 1028 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 ATAD1Q8NBU5 361 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 BVESQ8NE79 360 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 CEP76Q8TAP6 659 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 HNRNPLLQ8WVV9 542 aaKnown RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 CD101Q93033 1021 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 C18orf25Q96B23 403 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 CHFRQ96EP1 664 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 LRIG1Q96JA1 1093 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 CNOT6LQ96LI5 555 aaKnown RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 JAKMIP1Q96N16 626 aaKnown RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 ZNF396Q96N95 335 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 PGLYRP2Q96PD5 576 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 BBC3Q96PG8 261 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 GCNAQ96QF7 691 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 TACO1Q9BSH4 297 aaKnown RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 TCHPQ9BT92 498 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 SGPP1Q9BX95 441 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 TRIM55Q9BYV6 548 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 TTC12Q9H892 705 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 GRPEL1Q9HAV7 217 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 PTPRHQ9HD43 1115 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 TUFT1Q9NNX1 390 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 UTP6Q9NYH9 597 aaKnown RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 SUN2Q9UH99 717 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 TBX20Q9UMR3 447 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 TIMM13Q9Y5L4 95 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 MYH15Q9Y2K3 1946 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 ASPMQ8IZT6 3477 aa5.22□□□□□ -1.57
ATXN3-247ENST00000557311 MYH9P35579 1960 aaKnown RBP5.22□□□□□ -1.57
ATXN3-247ENST00000557311 SDK1Q7Z5N4 2213 aa5.21□□□□□ -1.57
ATXN3-247ENST00000557311 ANKRD11Q6UB99 2663 aaPredicted RBP5.21□□□□□ -1.57
ATXN3-247ENST00000557311 MTCL1Q9Y4B5 1905 aaKnown RBP5.21□□□□□ -1.57
ATXN3-247ENST00000557311 MTMR11A4FU01 709 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ARHGEF35A5YM69 484 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 NPIPB6E9PJ23 425 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 AURKAO14965 403 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 OPHN1O60890 802 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 OR4Q2P0C623 313 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 MCF2P10911 925 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ARSAP15289 507 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 PAMP19021 973 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 TYMPP19971 482 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 CYP3A5P20815 502 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 BCKDHBP21953 392 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 L1CAMP32004 1257 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 HSPA4P34932 840 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 HOXD12P35452 270 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 AARSP49588 968 aaKnown RBP eCLIP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 GSCP56915 257 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 GFPT1Q06210 699 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 BFSP1Q12934 665 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 SLC14A1Q13336 389 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ZNF268Q14587 947 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 VEPH1Q14D04 833 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 TRIP6Q15654 476 aaKnown RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 PDCD2Q16342 344 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 DUOXA1Q1HG43 343 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 SLC10A6Q3KNW5 377 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ZNF568Q3ZCX4 644 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 MAP9Q49MG5 647 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 LMBRD2Q68DH5 695 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ANO7Q6IWH7 933 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 DSTYKQ6XUX3 929 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 TMC6Q7Z403 805 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 MON1AQ86VX9 555 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 C1QL4Q86Z23 238 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 CPA6Q8N4T0 437 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ARHGEF39Q8N4T4 335 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 MAB21L3Q8N8X9 362 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 TMEM52Q8NDY8 209 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ANKRD20A12PQ8NF67 263 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 MYRIPQ8NFW9 859 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 OLIG1Q8TAK6 271 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 C17orf50Q8WW18 174 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ADAMTS14Q8WXS8 1223 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 KIFAP3Q92845 792 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 USP13Q92995 863 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ZNF274Q96GC6 653 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 RCC1LQ96I51 464 aaKnown RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 RMDN2Q96LZ7 410 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 AIFM3Q96NN9 605 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ACO2Q99798 780 aaKnown RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 POLR3CQ9BUI4 534 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 KIFC3Q9BVG8 833 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 LGR4Q9BXB1 951 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 MRPL4Q9BYD3 311 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms