RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 HNRNPA1L2Q32P51 320 aaKnown RBP12.78□□□□□ -0.36
SNX6-209ENST00000557265 FAM133BQ5BKY9 247 aaKnown RBP12.78□□□□□ -0.36
SNX6-209ENST00000557265 C9orf64Q5T6V5 341 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 FBXL19Q6PCT2 694 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 MMAAQ8IVH4 418 aaKnown RBP12.78□□□□□ -0.36
SNX6-209ENST00000557265 MFN1Q8IWA4 741 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 FBXL13Q8NEE6 735 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 OR2T34Q8NGX1 318 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 FIBINQ8TAL6 211 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 UBA3Q8TBC4 463 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 TSC1Q92574 1164 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 LMLNQ96KR4 655 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 FCRL3Q96P31 734 aaPredicted RBP12.78□□□□□ -0.36
SNX6-209ENST00000557265 OMDQ99983 421 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 NRSN2Q9GZP1 204 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 GDF3Q9NR23 364 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 HESX1Q9UBX0 185 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 CFAP46Q8IYW2 2715 aa12.77□□□□□ -0.36
SNX6-209ENST00000557265 YKT6O15498 198 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 IRAK2O43187 625 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 MYL1P05976 194 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 ZSCAN22P10073 491 aaPredicted RBP12.77□□□□□ -0.37
SNX6-209ENST00000557265 LCP1P13796 627 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 EPHA8P29322 1005 aaPredicted RBP12.77□□□□□ -0.37
SNX6-209ENST00000557265 SLC6A4P31645 630 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 SLC8A1P32418 973 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 MXI1P50539 228 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 BST2Q10589 180 aaKnown RBP12.77□□□□□ -0.37
SNX6-209ENST00000557265 BNIP3Q12983 259 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 SGO2Q562F6 1265 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 UNC45BQ8IWX7 931 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 ZNF557Q8N988 423 aaPredicted RBP12.77□□□□□ -0.37
SNX6-209ENST00000557265 LSM14AQ8ND56 463 aaKnown RBP12.77□□□□□ -0.37
SNX6-209ENST00000557265 BAP1Q92560 729 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 EEF2KMTQ96G04 330 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 SERAC1Q96JX3 654 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 MRGPRX3Q96LB0 322 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 IRX2Q9BZI1 471 aaPredicted RBP12.77□□□□□ -0.37
SNX6-209ENST00000557265 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 RCOR1Q9UKL0 485 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 INTS6Q9UL03 887 aaKnown RBP12.77□□□□□ -0.37
SNX6-209ENST00000557265 MYH10P35580 1976 aa12.77□□□□□ -0.37
SNX6-209ENST00000557265 A0A1B0GVL5 298 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 TTC34A8MYJ7 566 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 TLR4O00206 839 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 ACSL4O60488 711 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 RHOBTB3O94955 611 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 F13A1P00488 732 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 IGLV3-27P01718 113 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 ASLP04424 464 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 CD19P15391 556 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 PFKFB1P16118 471 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 CTSOP43234 321 aaPredicted RBP12.76□□□□□ -0.37
SNX6-209ENST00000557265 CCR5P51681 352 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 NXPH1P58417 271 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 DAOAP59103 153 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 MCCD1P59942 119 aaPredicted RBP12.76□□□□□ -0.37
SNX6-209ENST00000557265 ARID5BQ14865 1188 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 NUGGCQ68CJ6 796 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 ATL3Q6DD88 541 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 MSANTD2Q6P1R3 559 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 MMS22LQ6ZRQ5 1243 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 ZNF605Q86T29 641 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 CARNMT1Q8N4J0 409 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 AADATQ8N5Z0 425 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 KDM1BQ8NB78 822 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 OR14C36Q8NHC7 312 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 SNIP1Q8TAD8 396 aaKnown RBP12.76□□□□□ -0.37
SNX6-209ENST00000557265 KCTD13Q8WZ19 329 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 FGF11Q92914 225 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 MYEOVQ96EZ4 313 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 PRICKLE1Q96MT3 831 aaPredicted RBP12.76□□□□□ -0.37
SNX6-209ENST00000557265 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 CNGB3Q9NQW8 809 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 USP25Q9UHP3 1055 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 CFAP45Q9UL16 551 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 FZD4Q9ULV1 537 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 ERVW-1Q9UQF0 538 aa12.76□□□□□ -0.37
SNX6-209ENST00000557265 TARSL2A2RTX5 802 aaKnown RBP12.75□□□□□ -0.37
SNX6-209ENST00000557265 C10orf142B7Z368 130 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 O00370 1275 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 PIK3R2O00459 728 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 BRINP1O60477 761 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 STX10O60499 249 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 GABBR2O75899 941 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 SETSIPP0DME0 302 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 PLA2G2AP14555 144 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 GOT1P17174 413 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 CKMT2P17540 419 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 GLDCP23378 1020 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 RXRGP48443 463 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 PSMD8P48556 350 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 RGS7P49802 495 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 TBX4P57082 545 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 RPS24P62847 133 aaKnown RBP12.75□□□□□ -0.37
SNX6-209ENST00000557265 DNM1Q05193 864 aaKnown RBP12.75□□□□□ -0.37
SNX6-209ENST00000557265 CCDC173Q0VFZ6 552 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 ILKQ13418 452 aa12.75□□□□□ -0.37
SNX6-209ENST00000557265 CUL2Q13617 745 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms