RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 SGSM2O43147 1006 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 RRP8O43159 456 aaKnown RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 MARCH6O60337 910 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 EPHX1P07099 455 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 C8BP07358 591 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 COL4A2P08572 1712 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 HLA-EP13747 358 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 ARSAP15289 507 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 KCNE1P15382 129 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 DDX6P26196 483 aaKnown RBP eCLIP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 CHMLP26374 656 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 THBS2P35442 1172 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 AVPR1AP37288 418 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 TUFMP49411 452 aaKnown RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 EXOSC10Q01780 885 aaKnown RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 ZNF33AQ06730 810 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 SCRN1Q12765 414 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 PRPF4BQ13523 1007 aaKnown RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 MYBPC2Q14324 1141 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 ZNF268Q14587 947 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 SMAD1Q15797 465 aaKnown RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 DCAF4L1Q3SXM0 396 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 WDR81Q562E7 1941 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 C2orf27AQ580R0 203 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 CDCA2Q69YH5 1023 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 ZC3H18Q86VM9 953 aaKnown RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 TPH2Q8IWU9 490 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 CPA6Q8N4T0 437 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 KYQ8NBH2 561 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 ATAD1Q8NBU5 361 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 OR2I1PQ8NGU4 316 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 PIP4K2CQ8TBX8 421 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 ATP2A3Q93084 1043 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 ZNF419Q96HQ0 510 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 HSD17B14Q9BPX1 270 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 GORASP1Q9BQQ3 440 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 LXNQ9BS40 222 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 POLR3CQ9BUI4 534 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 LRRC2Q9BYS8 371 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 BACH2Q9BYV9 841 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 C2orf40Q9H1Z8 148 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 SLKQ9H2G2 1235 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 KIF9Q9HAQ2 790 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 FSCN3Q9NQT6 498 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 SH3GLB2Q9NR46 395 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 RGL1Q9NZL6 768 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 CCL26Q9Y258 94 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 YIPF1Q9Y548 306 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 NUB1Q9Y5A7 615 aa5.1□□□□□ -1.59
SCFD1-223ENST00000557076 RBM8AQ9Y5S9 174 aaKnown RBP5.1□□□□□ -1.59
SCFD1-223ENST00000557076 M0QZQ0 153 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 TDP2O95551 362 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 FUCA1P04066 466 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 ATXN1LP0C7T5 689 aaKnown RBP5.09□□□□□ -1.59
SCFD1-223ENST00000557076 C6P13671 934 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 HNRNPLP14866 589 aaKnown RBP eCLIP5.09□□□□□ -1.594e-7■■■□□ 15
SCFD1-223ENST00000557076 GNSP15586 552 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 ZNF20P17024 532 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 U2AF2P26368 475 aaKnown RBP eCLIP5.09□□□□□ -1.591e-8■■□□□ 13.7
SCFD1-223ENST00000557076 RHDQ02161 417 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 YWHAHQ04917 246 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-223ENST00000557076 BFSP1Q12934 665 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 CTTNQ14247 550 aaKnown RBP5.09□□□□□ -1.59
SCFD1-223ENST00000557076 PLEKHG6Q3KR16 790 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 GLRA4Q5JXX5 417 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 COLEC12Q5KU26 742 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 NAIF1Q69YI7 327 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-223ENST00000557076 PPP4R3AQ6IN85 833 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 CCDC81Q6ZN84 652 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 APBB1IPQ7Z5R6 666 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-223ENST00000557076 MON1AQ86VX9 555 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 TMPRSS12Q86WS5 348 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 MIB1Q86YT6 1006 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 ZBTB8OSQ8IWT0 167 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 CCDC33Q8N5R6 958 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 MAB21L3Q8N8X9 362 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 CCDC148Q8NFR7 591 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 OSCP1Q8WVF1 389 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 ZMAT2Q96NC0 199 aaKnown RBP5.09□□□□□ -1.59
SCFD1-223ENST00000557076 C8orf49Q96NF6 230 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 RWDD1Q9H446 243 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-223ENST00000557076 KCNMB3Q9NPA1 279 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 TOPORSQ9NS56 1045 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-223ENST00000557076 DUS2Q9NX74 493 aaKnown RBP5.09□□□□□ -1.59
SCFD1-223ENST00000557076 IL17BQ9UHF5 180 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 DDX25Q9UHL0 483 aaKnown RBP5.09□□□□□ -1.59
SCFD1-223ENST00000557076 NFE2L3Q9Y4A8 694 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 PCDHGB2Q9Y5G2 931 aa5.09□□□□□ -1.59
SCFD1-223ENST00000557076 BOD1L1Q8NFC6 3051 aa5.09□□□□□ -1.6
SCFD1-223ENST00000557076 DOPEY2Q9Y3R5 2298 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 EML5Q05BV3 1969 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 VWA8A3KMH1 1905 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 A0A1W2PQH9 124 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 MROH6A6NGR9 719 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 LRRIQ4A6NIV6 560 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 GOLGA8AA7E2F4 631 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 GOLGA8BA8MQT2 603 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 SLC27A2O14975 620 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 TNFSF14O43557 240 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms