RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 GRAMD1AQ96CP6 724 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 DCLK3Q9C098 648 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 TBC1D7Q9P0N9 293 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 GGA2Q9UJY4 613 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 NAGPAQ9UK23 515 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 FZD4Q9ULV1 537 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 SCML2Q9UQR0 700 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 LRRK1Q38SD2 2015 aa13.06□□□□□ -0.32
PSEN1-220ENST00000557037 CCDC187A0A096LP49 1063 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 A1L4Q6 167 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 VWA3AA6NCI4 1184 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 LATO43561 262 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 PPP1R37O75864 691 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 PIAS2O75928 621 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 NEBLO76041 1014 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 PABPC1P11940 636 aaKnown RBP13.05□□□□□ -0.32
PSEN1-220ENST00000557037 MLLT3P42568 568 aaPredicted RBP13.05□□□□□ -0.32
PSEN1-220ENST00000557037 GUSBP11Q6P575 273 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 TRAPPC11Q7Z392 1133 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 ZSCAN1Q8NBB4 408 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 HVCN1Q96D96 273 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 KLHDC7BQ96G42 594 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 ACCSQ96QU6 501 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 MYOCQ99972 504 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 SMYD3Q9H7B4 428 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 SYNDIG1Q9H7V2 258 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 TMPRSS4Q9NRS4 437 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 BLOC1S4Q9NUP1 217 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 KLHL11Q9NVR0 708 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 NLGN3Q9NZ94 848 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 ARHGAP20Q9P2F6 1191 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 EXOC7Q9UPT5 735 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 MTORP42345 2549 aa13.05□□□□□ -0.32
PSEN1-220ENST00000557037 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.04□□□□□ -0.32
PSEN1-220ENST00000557037 K7ESM1 405 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 AGFG2O95081 481 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 ATP5BP06576 529 aaKnown RBP13.04□□□□□ -0.32
PSEN1-220ENST00000557037 GOT1P17174 413 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 POLR2EP19388 210 aaKnown RBP13.04□□□□□ -0.32
PSEN1-220ENST00000557037 GARTP22102 1010 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 ELAVL4P26378 380 aaKnown RBP13.04□□□□□ -0.32
PSEN1-220ENST00000557037 TNFRSF8P28908 595 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 COG7P83436 770 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 OVGP1Q12889 678 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 ZNF177Q13360 481 aaPredicted RBP13.04□□□□□ -0.32
PSEN1-220ENST00000557037 MORC3Q14149 939 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 ZNF542PQ5EBM4 170 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.04□□□□□ -0.32
PSEN1-220ENST00000557037 SND1Q7KZF4 910 aaKnown RBP eCLIP13.04□□□□□ -0.32
PSEN1-220ENST00000557037 SCD5Q86SK9 330 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 ACOT1Q86TX2 421 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 SYCP3Q8IZU3 236 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 CPXM2Q8N436 756 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 SLC2A14Q8TDB8 520 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 ADNPQ9H2P0 1102 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 EVA1BQ9NVM1 165 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 SEL1LQ9UBV2 794 aa13.04□□□□□ -0.32
PSEN1-220ENST00000557037 OTOGQ6ZRI0 2925 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 CLSTN1O94985 981 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 FAM163BP0C2L3 166 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 HGFP14210 728 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 COL8A1P27658 744 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 CD70P32970 193 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 KCNAB2Q13303 367 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 DRAP1Q14919 205 aaPredicted RBP13.03□□□□□ -0.32
PSEN1-220ENST00000557037 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 MPPE1Q53F39 396 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 C9orf64Q5T6V5 341 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
PSEN1-220ENST00000557037 SCARA5Q6ZMJ2 495 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 CBWD2Q8IUF1 395 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 SRRM1Q8IYB3 904 aaKnown RBP13.03□□□□□ -0.32
PSEN1-220ENST00000557037 AHI1Q8N157 1196 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 GPD1LQ8N335 351 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 RAD54LQ92698 747 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 ELMO3Q96BJ8 720 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 STRA6Q9BX79 667 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 ZNF768Q9H5H4 540 aaKnown RBP13.03□□□□□ -0.32
PSEN1-220ENST00000557037 MRPL44Q9H9J2 332 aaKnown RBP13.03□□□□□ -0.32
PSEN1-220ENST00000557037 USP29Q9HBJ7 922 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 ZNF71Q9NQZ8 489 aaPredicted RBP13.03□□□□□ -0.32
PSEN1-220ENST00000557037 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.03□□□□□ -0.32
PSEN1-220ENST00000557037 FAM49BQ9NUQ9 324 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 CYTH4Q9UIA0 394 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 ANAPC2Q9UJX6 822 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 PCDHGA7Q9Y5G6 932 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 NF1P21359 2839 aa13.03□□□□□ -0.32
PSEN1-220ENST00000557037 SLC12A8A0AV02 714 aa13.02□□□□□ -0.33
PSEN1-220ENST00000557037 RALAP11233 206 aa13.02□□□□□ -0.33
PSEN1-220ENST00000557037 ADORA2BP29275 332 aa13.02□□□□□ -0.33
PSEN1-220ENST00000557037 UGT1A5P35504 534 aa13.02□□□□□ -0.33
PSEN1-220ENST00000557037 HARS2P49590 506 aaKnown RBP13.02□□□□□ -0.33
PSEN1-220ENST00000557037 PDX1P52945 283 aa13.02□□□□□ -0.33
PSEN1-220ENST00000557037 POLE2P56282 527 aa13.02□□□□□ -0.33
PSEN1-220ENST00000557037 MYL6P60660 151 aa13.02□□□□□ -0.33
PSEN1-220ENST00000557037 PDE4CQ08493 712 aa13.02□□□□□ -0.33
PSEN1-220ENST00000557037 KCNMA1Q12791 1236 aa13.02□□□□□ -0.33
PSEN1-220ENST00000557037 HNRNPA1L2Q32P51 320 aaKnown RBP13.02□□□□□ -0.33
PSEN1-220ENST00000557037 PERM1Q5SV97 790 aa13.02□□□□□ -0.33
PSEN1-220ENST00000557037 KIAA0907Q7Z7F0 614 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms