RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MECRQ9BV79 373 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 MYLK2Q9H1R3 596 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 WDCPQ9H6R7 721 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 ECT2Q9H8V3 914 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 NMUR1Q9HB89 426 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 NPHS2Q9NP85 383 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 EIF2B3Q9NR50 452 aaKnown RBP10.4□□□□□ -0.74
TMEM260-211ENST00000556648 PCMTD2Q9NV79 361 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 KANSL3Q9P2N6 904 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 OR12D3Q9UGF7 316 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 SFMBT1Q9UHJ3 866 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 ZNF180Q9UJW8 692 aa10.4□□□□□ -0.74
TMEM260-211ENST00000556648 IGLV3-25P01717 112 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 SNRPAP09012 282 aaKnown RBP10.4□□□□□ -0.75
TMEM260-211ENST00000556648 EPHB2P29323 1055 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 GMPRP36959 345 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 AIF1P55008 147 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 KCNJ2P63252 427 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 PPIDQ08752 370 aaKnown RBP10.4□□□□□ -0.75
TMEM260-211ENST00000556648 GALNT2Q10471 571 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 PARP6Q2NL67 630 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 SLC39A12Q504Y0 691 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 ARTNQ5T4W7 220 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 MAP3K21Q5TCX8 1036 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 SCD5Q86SK9 330 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 KIF2BQ8N4N8 673 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.4□□□□□ -0.75
TMEM260-211ENST00000556648 PCSK9Q8NBP7 692 aaKnown RBP10.4□□□□□ -0.75
TMEM260-211ENST00000556648 IRGQQ8WZA9 623 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 RNF34Q969K3 372 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 GRAMD1AQ96CP6 724 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 APOL2Q9BQE5 337 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 PRDM16Q9HAZ2 1276 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 RXFP1Q9HBX9 757 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 RGS18Q9NS28 235 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 MOCS1Q9NZB8 636 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 KLHL14Q9P2G3 628 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 IGSF9Q9P2J2 1179 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 DNAJB4Q9UDY4 337 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 PCDHB8Q9UN66 801 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 MAGED2Q9UNF1 606 aaPredicted RBP10.4□□□□□ -0.75
TMEM260-211ENST00000556648 CHKBQ9Y259 395 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 PRG3Q9Y2Y8 225 aaPredicted RBP10.4□□□□□ -0.75
TMEM260-211ENST00000556648 PSAT1Q9Y617 370 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 NUMBLQ9Y6R0 609 aa10.4□□□□□ -0.75
TMEM260-211ENST00000556648 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.39□□□□□ -0.75
TMEM260-211ENST00000556648 CCDC195A0A1B0GUA6 201 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 SDR42E2A6NKP2 422 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 COPEO14579 308 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 TNFRSF10BO14763 440 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 RPLP2P05387 115 aaKnown RBP10.39□□□□□ -0.75
TMEM260-211ENST00000556648 SRGAP2BP0DMP2 458 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 MLNP12872 115 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 NFKB1P19838 968 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 GARSP41250 739 aaKnown RBP10.39□□□□□ -0.75
TMEM260-211ENST00000556648 HCAR3P49019 387 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 BNIP1Q12981 228 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 CRYMQ14894 314 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 ARL13BQ3SXY8 428 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 PLEKHG4Q58EX7 1191 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 DCLRE1AQ6PJP8 1040 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 RNF180Q86T96 592 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 SPATA2LQ8IUW3 424 aaPredicted RBP10.39□□□□□ -0.75
TMEM260-211ENST00000556648 SCN4BQ8IWT1 228 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 TTC9BQ8N6N2 239 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 SMC1BQ8NDV3 1235 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 USP33Q8TEY7 942 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 CASP10Q92851 521 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 ZNF419Q96HQ0 510 aaPredicted RBP10.39□□□□□ -0.75
TMEM260-211ENST00000556648 UROC1Q96N76 676 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 FCRL3Q96P31 734 aaPredicted RBP10.39□□□□□ -0.75
TMEM260-211ENST00000556648 SLC13A1Q9BZW2 595 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 SIK2Q9H0K1 926 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 OSER1Q9NX31 292 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 ABI2Q9NYB9 513 aaPredicted RBP10.39□□□□□ -0.75
TMEM260-211ENST00000556648 UBP1Q9NZI7 540 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 HCSTQ9UBK5 93 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 SRRDQ9UH36 339 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 DSEQ9UL01 958 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 CEP350Q5VT06 3117 aa10.39□□□□□ -0.75
TMEM260-211ENST00000556648 VWA8A3KMH1 1905 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 A0A1W2PQH9 124 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 INPPL1O15357 1258 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 IRAK2O43187 625 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 KRT37O76014 449 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 F9P00740 461 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 ERVK-10P10266 1014 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 GRIK1P39086 918 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 SERPINB4P48594 390 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 GATMP50440 423 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 TTC3P53804 2025 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 CDK16Q00536 496 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 TSPY1Q01534 308 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 YWHAHQ04917 246 aaPredicted RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 DSC1Q08554 894 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 EIF4EBP2Q13542 120 aaPredicted RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 RWDD4Q6NW29 188 aaKnown RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 CYB5D1Q6P9G0 228 aa10.38□□□□□ -0.75
TMEM260-211ENST00000556648 TBC1D1Q86TI0 1168 aaPredicted RBP10.38□□□□□ -0.75
TMEM260-211ENST00000556648 RASSF3Q86WH2 238 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms