RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 KCNAB2Q13303 367 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 SLC14A1Q13336 389 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 SQSTM1Q13501 440 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 LAPTM5Q13571 262 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 ZNF268Q14587 947 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 KIR3DS1Q14943 382 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 VEPH1Q14D04 833 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 TESK1Q15569 626 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 TRIP6Q15654 476 aaKnown RBP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 DUOXA1Q1HG43 343 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 ZNF568Q3ZCX4 644 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 FAM209AQ5JX71 171 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 LMBRD2Q68DH5 695 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 ANO7Q6IWH7 933 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 DSTYKQ6XUX3 929 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 SLCO6A1Q86UG4 719 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 MON1AQ86VX9 555 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 FAM129CQ86XR2 697 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 IGDCC3Q8IVU1 814 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 PPIL6Q8IXY8 311 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 CPA6Q8N4T0 437 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 MAB21L3Q8N8X9 362 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 OLIG1Q8TAK6 271 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 USP33Q8TEY7 942 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 FRS2Q8WU20 508 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 ADAMTS14Q8WXS8 1223 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 KIFAP3Q92845 792 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 USP13Q92995 863 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 KISS1RQ969F8 398 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 ZNF274Q96GC6 653 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 C1orf159Q96HA4 380 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 EXOC2Q96KP1 924 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 AIFM3Q96NN9 605 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 ACO2Q99798 780 aaKnown RBP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 POLR3CQ9BUI4 534 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 KIFC3Q9BVG8 833 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 MRPL4Q9BYD3 311 aaKnown RBP5.21□□□□□ -1.58
ATXN3-239ENST00000556315 TPSD1Q9BZJ3 242 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 CDT1Q9H211 546 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 ECT2Q9H8V3 914 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 KIF9Q9HAQ2 790 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 PLEKHA5Q9HAU0 1116 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 TMEM74BQ9NUR3 256 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 TDP1Q9NUW8 608 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 PILRBQ9UKJ0 227 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 ACSL6Q9UKU0 697 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 DOCK6Q96HP0 2047 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 NOTCH4Q99466 2003 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 CEP295Q9C0D2 2601 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 PHLPP2Q6ZVD8 1323 aa5.21□□□□□ -1.58
ATXN3-239ENST00000556315 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 ESYT3A0FGR9 886 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 K7EQS6 105 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 CDC45O75419 566 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 MED24O75448 989 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 SOAT2O75908 522 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 CDKL5O76039 1030 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 CLSTN1O94985 981 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 LARGE1O95461 756 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 SERPINF2P08697 491 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 CD59P13987 128 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 PROZP22891 400 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 U2AF2P26368 475 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 LRPAP1P30533 357 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 L1CAMP32004 1257 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 P2RY2P41231 377 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 PTGER3P43115 390 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 MRPS21P82921 87 aaKnown RBP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 SMARCB1Q12824 385 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 ZBTB6Q15916 424 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 CRY1Q16526 586 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 PRSS53Q2L4Q9 553 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 SKOR2Q2VWA4 1001 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 MGAT5BQ3V5L5 792 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 EARS2Q5JPH6 523 aaKnown RBP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 FOXB2Q5VYV0 432 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 LYSMD4Q5XG99 296 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 SDE2Q6IQ49 451 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 USP53Q70EK8 1073 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 RABEPKQ7Z6M1 372 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 TMEM52Q8NDY8 209 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 ERMNQ8TAM6 284 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 C2orf15Q8WU43 125 aaKnown RBP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 OSCP1Q8WVF1 389 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 MRPS31Q92665 395 aaKnown RBP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 DIO2Q92813 273 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 YTHDC1Q96MU7 727 aaKnown RBP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 MTMR9Q96QG7 549 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 FNBP1Q96RU3 617 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 TSPAN18Q96SJ8 248 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 SEPT5Q99719 369 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 ZFYVE21Q9BQ24 234 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 TARS2Q9BW92 718 aaKnown RBP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 GTPBP2Q9BX10 602 aaKnown RBP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 POLD4Q9HCU8 107 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 TNFRSF12AQ9NP84 129 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 FANCLQ9NW38 375 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 DUS2Q9NX74 493 aaKnown RBP5.2□□□□□ -1.58
ATXN3-239ENST00000556315 DKK4Q9UBT3 224 aa5.2□□□□□ -1.58
ATXN3-239ENST00000556315 KCNG1Q9UIX4 513 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms