RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CEP192Q8TEP8 1941 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 KCNJ18B7U540 433 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 WASH3PC4AMC7 463 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 KCNK3O14649 394 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 HNRNPDLO14979 420 aaKnown RBP7.27□□□□□ -1.25
ATXN3-236ENST00000556220 BRINP1O60477 761 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 HUS1O60921 280 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 MBL2P11226 248 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-236ENST00000556220 PDIA4P13667 645 aaKnown RBP7.27□□□□□ -1.25
ATXN3-236ENST00000556220 PCSK1P29120 753 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 ACTN2P35609 894 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 PNPLA4P41247 253 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 LHX1P48742 406 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 ACOT2P49753 483 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 AFF3P51826 1226 aaKnown RBP7.27□□□□□ -1.25
ATXN3-236ENST00000556220 NCKAP1LP55160 1127 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 CLDN6P56747 220 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 POU5F1Q01860 360 aaKnown RBP7.27□□□□□ -1.25
ATXN3-236ENST00000556220 RAD51AP2Q09MP3 1159 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 LY6DQ14210 128 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 CCDC142Q17RM4 750 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 ANO4Q32M45 955 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 TBC1D25Q3MII6 688 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 COLEC12Q5KU26 742 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 GRAMD4Q6IC98 578 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 C4orf50Q6ZRC1 276 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 TMEM25Q86YD3 366 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 TMEM86AQ8N2M4 240 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 C4orf32Q8N8J7 132 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 SCFD1Q8WVM8 642 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 IGSF8Q969P0 613 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 MISP3Q96FF7 219 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 WDR89Q96FK6 387 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-236ENST00000556220 ZNF560Q96MR9 790 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 FANCD2OSQ96PS1 177 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 DUSP9Q99956 384 aaKnown RBP7.27□□□□□ -1.25
ATXN3-236ENST00000556220 NUP58Q9BVL2 599 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 TTLL2Q9BWV7 592 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 SPHK2Q9NRA0 654 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 EHD2Q9NZN4 543 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 MAGEC2Q9UBF1 373 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-236ENST00000556220 FTSJ1Q9UET6 329 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 IL17BQ9UHF5 180 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 ANKRD6Q9Y2G4 727 aa7.27□□□□□ -1.25
ATXN3-236ENST00000556220 PRRT4C9JH25 899 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 H0Y8X5 98 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 ENC1O14682 589 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 GABRDO14764 452 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 PAPSS1O43252 624 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-236ENST00000556220 RFPL3O75679 317 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 IGLV3-19P01714 112 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 GSTP1P09211 210 aaKnown RBP7.26□□□□□ -1.25
ATXN3-236ENST00000556220 SCP2P22307 547 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 BDNFP23560 247 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 ADSSP30520 456 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 CCT8P50990 548 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 TPMTP51580 245 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 TAF10Q12962 218 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 INAVAQ3KP66 663 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 FUT11Q495W5 492 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 ARHGAP40Q5TG30 622 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 HES3Q5TGS1 186 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 KRT79Q5XKE5 535 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 SLC39A4Q6P5W5 647 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 DTHD1Q6ZMT9 781 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 USP49Q70CQ1 688 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 KCNK18Q7Z418 384 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 OSTM1Q86WC4 334 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 ERICH1Q86X53 443 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 NT5DC4Q86YG4 428 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 TMPRSS6Q8IU80 811 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 BBS7Q8IWZ6 715 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 IGSF22Q8N9C0 903 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 EPS8L3Q8TE67 593 aaKnown RBP7.26□□□□□ -1.25
ATXN3-236ENST00000556220 SIPA1Q96FS4 1042 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 MED8Q96G25 268 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 XPO6Q96QU8 1125 aaKnown RBP7.26□□□□□ -1.25
ATXN3-236ENST00000556220 RAB34Q9BZG1 259 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 MKRN2Q9H000 416 aaKnown RBP7.26□□□□□ -1.25
ATXN3-236ENST00000556220 PCED1AQ9H1Q7 454 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 DNAJC17Q9NVM6 304 aaKnown RBP7.26□□□□□ -1.25
ATXN3-236ENST00000556220 GDAP2Q9NXN4 497 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 LARSQ9P2J5 1176 aaKnown RBP7.26□□□□□ -1.25
ATXN3-236ENST00000556220 SH3BP1Q9Y3L3 701 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 SLCO1B1Q9Y6L6 691 aa7.26□□□□□ -1.25
ATXN3-236ENST00000556220 TEP1Q99973 2627 aaKnown RBP7.25□□□□□ -1.25
ATXN3-236ENST00000556220 LRRK2Q5S007 2527 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 HCRTO43612 131 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 DFNA5O60443 496 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 ATP2C2O75185 946 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 REC8O95072 547 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 LDOC1O95751 146 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-236ENST00000556220 CISD3P0C7P0 127 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 ANXA13P27216 316 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 POLR2BP30876 1174 aaKnown RBP7.25□□□□□ -1.25
ATXN3-236ENST00000556220 ZNF132P52740 706 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 UCNP55089 124 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 TMPRSS3P57727 454 aa7.25□□□□□ -1.25
ATXN3-236ENST00000556220 NOP14P78316 857 aaKnown RBP7.25□□□□□ -1.25
ATXN3-236ENST00000556220 TRIM29Q14134 588 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms