RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 SLC44A1Q8WWI5 657 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 ZBED3Q96IU2 234 aaPredicted RBP15.22■□□□□ 0.03
CUX1-215ENST00000556210 SEPT5Q99719 369 aaPredicted RBP15.22■□□□□ 0.03
CUX1-215ENST00000556210 NUF2Q9BZD4 464 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 LAMB1P07942 1786 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 USP1O94782 785 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 ATG7O95352 703 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 PSMG1O95456 288 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 PIRTP0C851 137 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 MAXP61244 160 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 CDHR3Q6ZTQ4 885 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 FICDQ9BVA6 458 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 VTA1Q9NP79 307 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 PFDN4Q9NQP4 134 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 SAR1AQ9NR31 198 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 SFMBT1Q9UHJ3 866 aa15.22■□□□□ 0.03
CUX1-215ENST00000556210 CCL22O00626 93 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 AHCYL1O43865 530 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 ZBTB48P10074 688 aaPredicted RBP15.21■□□□□ 0.03
CUX1-215ENST00000556210 NAGLUP54802 743 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 MED21Q13503 144 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 KIAA1841Q6NSI8 718 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 ADGRD1Q6QNK2 874 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 HFE2Q6ZVN8 426 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 CMASQ8NFW8 434 aaPredicted RBP15.21■□□□□ 0.03
CUX1-215ENST00000556210 SLCO2A1Q92959 643 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 RMDN1Q96DB5 314 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 EBF4Q9BQW3 602 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 PPCSQ9HAB8 311 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 LGALS13Q9UHV8 139 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 ZNF112Q9UJU3 913 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 SSX2IPQ9Y2D8 614 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 SLC4A7Q9Y6M7 1214 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 IQCA1LA6NCM1 817 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 CHADO15335 359 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 MSI1O43347 362 aaKnown RBP15.21■□□□□ 0.03
CUX1-215ENST00000556210 NFKB1P19838 968 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 ANO7Q6IWH7 933 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 ABTB1Q969K4 478 aaPredicted RBP15.21■□□□□ 0.03
CUX1-215ENST00000556210 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 TPST1O60507 370 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 MGAT5Q09328 741 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 CCDC15Q0P6D6 951 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 LAMB3Q13751 1172 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 CSHL1Q14406 222 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 CCL14Q16627 93 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 ACAD11Q709F0 780 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 C10orf107Q8IVU9 208 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.21■□□□□ 0.03
CUX1-215ENST00000556210 UCMAQ8WVF2 138 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 ATP6V1E2Q96A05 226 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 VPS39Q96JC1 886 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 SUDS3Q9H7L9 328 aaPredicted RBP15.21■□□□□ 0.03
CUX1-215ENST00000556210 RBM22Q9NW64 420 aaKnown RBP eCLIP15.21■□□□□ 0.03
CUX1-215ENST00000556210 DTLQ9NZJ0 730 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 MPP6Q9NZW5 540 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 V9GYQ6 96 aa15.21■□□□□ 0.03
CUX1-215ENST00000556210 ATP8B3O60423 1300 aa15.21■□□□□ 0.02
CUX1-215ENST00000556210 A0A0A0MRY4 1105 aa15.21■□□□□ 0.02
CUX1-215ENST00000556210 COPAP53621 1224 aa15.21■□□□□ 0.02
CUX1-215ENST00000556210 MGAT5BQ3V5L5 792 aa15.21■□□□□ 0.02
CUX1-215ENST00000556210 SPATA22Q8NHS9 363 aa15.21■□□□□ 0.02
CUX1-215ENST00000556210 BLOC1S5Q8TDH9 187 aa15.21■□□□□ 0.02
CUX1-215ENST00000556210 LRGUKQ96M69 825 aa15.21■□□□□ 0.02
CUX1-215ENST00000556210 SPATA13Q96N96 652 aa15.21■□□□□ 0.02
CUX1-215ENST00000556210 CHRAC1Q9NRG0 131 aa15.21■□□□□ 0.02
CUX1-215ENST00000556210 PDP2Q9P2J9 529 aa15.21■□□□□ 0.02
CUX1-215ENST00000556210 ADGRA2Q96PE1 1338 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 A0A0G2JLL6 359 aaPredicted RBP15.2■□□□□ 0.02
CUX1-215ENST00000556210 LIN7AO14910 233 aaPredicted RBP15.2■□□□□ 0.02
CUX1-215ENST00000556210 MMP3P08254 477 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 NPR3P17342 541 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 PSEN2P49810 448 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 EFEMP1Q12805 493 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 DBN1Q16643 649 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 OTOP3Q7RTS5 596 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 PRRT2Q7Z6L0 340 aaPredicted RBP15.2■□□□□ 0.02
CUX1-215ENST00000556210 PNPLA1Q8N8W4 532 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 MCRS1Q96EZ8 462 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 AGAP2Q99490 1192 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 LRRC40Q9H9A6 602 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 PKNOX1P55347 436 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 DSG1Q02413 1049 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 DDIASQ8IXT1 998 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 ARHGAP18Q8N392 663 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 EFHBQ8N7U6 833 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 CATSPER2Q96P56 530 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 WDR55Q9H6Y2 383 aaPredicted RBP15.2■□□□□ 0.02
CUX1-215ENST00000556210 NT5MQ9NPB1 228 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 ETAA1Q9NY74 926 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 IPPQ9Y573 584 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 SMAPO00193 183 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 GLRA3O75311 464 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 SETSIPP0DME0 302 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 FDFT1P37268 417 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 ROR2Q01974 943 aaKnown RBP15.2■□□□□ 0.02
CUX1-215ENST00000556210 AFAP1L2Q8N4X5 818 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 SNX31Q8N9S9 440 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 WNT8BQ93098 351 aa15.2■□□□□ 0.02
CUX1-215ENST00000556210 ZNF184Q99676 751 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms