RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 NUCKS1Q9H1E3 243 aaKnown RBP19.52■□□□□ 0.72
CDKN3-209ENST00000556102 TM9SF3Q9HD45 589 aa19.52■□□□□ 0.72
CDKN3-209ENST00000556102 ST7Q9NRC1 585 aa19.52■□□□□ 0.72
CDKN3-209ENST00000556102 INTS6Q9UL03 887 aaKnown RBP19.52■□□□□ 0.72
CDKN3-209ENST00000556102 SCML1Q9UN30 329 aa19.52■□□□□ 0.72
CDKN3-209ENST00000556102 NAALADL1Q9UQQ1 740 aa19.52■□□□□ 0.72
CDKN3-209ENST00000556102 PTPRBP23467 1997 aa19.52■□□□□ 0.71
CDKN3-209ENST00000556102 PLXNB3Q9ULL4 1909 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 ZFYVE26Q68DK2 2539 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 FLRT2O43155 660 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 AFPP02771 609 aaKnown RBP19.51■□□□□ 0.71
CDKN3-209ENST00000556102 KRT5P13647 590 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 CSKP41240 450 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 GRIA4P48058 902 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 CDH18Q13634 790 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 MEA1Q16626 185 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 HNRNPA1L2Q32P51 320 aaKnown RBP19.51■□□□□ 0.71
CDKN3-209ENST00000556102 MS4A13Q5J8X5 152 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 DBX2Q6ZNG2 339 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 USP30Q70CQ3 517 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 TAC4Q86UU9 113 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 CCDC117Q8IWD4 279 aaPredicted RBP19.51■□□□□ 0.71
CDKN3-209ENST00000556102 CARNMT1Q8N4J0 409 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 KDM1BQ8NB78 822 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 BAHD1Q8TBE0 780 aaPredicted RBP19.51■□□□□ 0.71
CDKN3-209ENST00000556102 STK32AQ8WU08 396 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 TRIM62Q9BVG3 475 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 RSPH9Q9H1X1 276 aaPredicted RBP19.51■□□□□ 0.71
CDKN3-209ENST00000556102 MTG2Q9H4K7 406 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 NCKAP1Q9Y2A7 1128 aa19.51■□□□□ 0.71
CDKN3-209ENST00000556102 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.51■□□□□ 0.71
CDKN3-209ENST00000556102 NYNRINQ9P2P1 1898 aaKnown RBP19.51■□□□□ 0.71
CDKN3-209ENST00000556102 TP53BP1Q12888 1972 aaPredicted RBP19.51■□□□□ 0.71
CDKN3-209ENST00000556102 FSBPO95073 299 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 MOCS2O96007 188 aaPredicted RBP19.5■□□□□ 0.71
CDKN3-209ENST00000556102 CD27P26842 260 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 STX17P56962 302 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 PAK1Q13153 545 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 KIF19Q2TAC6 998 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 DCAF6Q58WW2 860 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 DENND1BQ6P3S1 775 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 SLCO6A1Q86UG4 719 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 ADAM32Q8TC27 787 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 MRGPRX3Q96LB0 322 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 SLC4A5Q9BY07 1137 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 PABPC3Q9H361 631 aaKnown RBP19.5■□□□□ 0.71
CDKN3-209ENST00000556102 ANKRD6Q9Y2G4 727 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 SNX11Q9Y5W9 270 aa19.5■□□□□ 0.71
CDKN3-209ENST00000556102 ANKRD11Q6UB99 2663 aaPredicted RBP19.5■□□□□ 0.71
CDKN3-209ENST00000556102 BIN1O00499 593 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 CAPN9O14815 690 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 MED7O43513 233 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 RNASEH1O60930 286 aaKnown RBP19.49■□□□□ 0.71
CDKN3-209ENST00000556102 SIN3BO75182 1162 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 LUC7L3O95232 432 aaKnown RBP19.49■□□□□ 0.71
CDKN3-209ENST00000556102 APOEP02649 317 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 SFSWAPQ12872 951 aaKnown RBP19.49■□□□□ 0.71
CDKN3-209ENST00000556102 ARID5BQ14865 1188 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 SUZ12Q15022 739 aaKnown RBP19.49■□□□□ 0.71
CDKN3-209ENST00000556102 FSCBQ5H9T9 825 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 SYPL2Q5VXT5 272 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 CFAP52Q8N1V2 620 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 CDC6Q99741 560 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 SRRTQ9BXP5 876 aaKnown RBP19.49■□□□□ 0.71
CDKN3-209ENST00000556102 UBE2TQ9NPD8 197 aaPredicted RBP19.49■□□□□ 0.71
CDKN3-209ENST00000556102 FBXL12Q9NXK8 326 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 KIAA1522Q9P206 1035 aaPredicted RBP19.49■□□□□ 0.71
CDKN3-209ENST00000556102 PLXNA2O75051 1894 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 CACNA1GO43497 2377 aa19.49■□□□□ 0.71
CDKN3-209ENST00000556102 FREM2Q5SZK8 3169 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 PAPSS1O43252 624 aaPredicted RBP19.48■□□□□ 0.71
CDKN3-209ENST00000556102 LETM1O95202 739 aaPredicted RBP19.48■□□□□ 0.71
CDKN3-209ENST00000556102 MOCS3O95396 460 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 CAPNS1P04632 268 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 SRPRAP08240 638 aaKnown RBP19.48■□□□□ 0.71
CDKN3-209ENST00000556102 PITRM1Q5JRX3 1037 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 KIAA0895LQ68EN5 471 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 CCNI2Q6ZMN8 369 aaPredicted RBP19.48■□□□□ 0.71
CDKN3-209ENST00000556102 MMS22LQ6ZRQ5 1243 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 ENOSF1Q7L5Y1 443 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 DHX40Q8IX18 779 aaKnown RBP19.48■□□□□ 0.71
CDKN3-209ENST00000556102 LGI2Q8N0V4 545 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 RHBDD1Q8TEB9 315 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 GANCQ8TET4 914 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 ZNF606Q8WXB4 792 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 IGSF8Q969P0 613 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 ORAI3Q9BRQ5 295 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 POPDC2Q9HBU9 364 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 CYTH4Q9UIA0 394 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 XPO7Q9UIA9 1087 aaKnown RBP19.48■□□□□ 0.71
CDKN3-209ENST00000556102 ERVW-1Q9UQF0 538 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 ITIH6Q6UXX5 1313 aa19.48■□□□□ 0.71
CDKN3-209ENST00000556102 TARSL2A2RTX5 802 aaKnown RBP19.47■□□□□ 0.71
CDKN3-209ENST00000556102 E5RJQ4 531 aa19.47■□□□□ 0.71
CDKN3-209ENST00000556102 THAP12O43422 761 aa19.47■□□□□ 0.71
CDKN3-209ENST00000556102 FGFR1OPO95684 399 aaKnown RBP19.47■□□□□ 0.71
CDKN3-209ENST00000556102 TRUB2O95900 331 aaKnown RBP19.47■□□□□ 0.71
CDKN3-209ENST00000556102 IGLV3-25P01717 112 aa19.47■□□□□ 0.71
CDKN3-209ENST00000556102 IGHV4-34P06331 123 aa19.47■□□□□ 0.71
CDKN3-209ENST00000556102 GNA15P30679 374 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms