RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 CLK3P49761 638 aaKnown RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 SGO1Q5FBB7 561 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 C10orf53Q8N6V4 93 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 IL17RAQ96F46 866 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 NFKBIZQ9BYH8 718 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 KLHL4Q9C0H6 718 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 KCNF1Q9H3M0 494 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 FBXO28Q9NVF7 368 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 ZMYM5Q9UJ78 669 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 GGA2Q9UJY4 613 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 PADI4Q9UM07 663 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 L1RE1Q9UN81 338 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 HS6ST1O60243 411 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 SHMT1P34896 483 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 GPR15P49685 360 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 SULT2A1Q06520 285 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 PLCL1Q15111 1095 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 CCDC142Q17RM4 750 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 PCID2Q5JVF3 399 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 CES5AQ6NT32 575 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 KCNMB4Q86W47 210 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 FAM131BQ86XD5 332 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 TDRD5Q8NAT2 981 aaKnown RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 STAG3L4Q8TBR4 150 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 CENPTQ96BT3 561 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 HIC2Q96JB3 615 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 KCND1Q9NSA2 647 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 PDZK1P1A8MUH7 402 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 LYPLA2O95372 231 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 POMCP01189 267 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 KELP23276 732 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 OR1E1P30953 314 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 SARSP49591 514 aaKnown RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 ACVR2BQ13705 512 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 PPP4R4Q6NUP7 873 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 FBXO16Q8IX29 292 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 ZNF248Q8NDW4 579 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 CIPCQ9C0C6 399 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 ENTPD4Q9Y227 616 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 EFR3BQ9Y2G0 817 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 DNAJC16Q9Y2G8 782 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 ITSN1Q15811 1721 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 CBX4O00257 560 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 PRMT3O60678 531 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 MAGEC1O60732 1142 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 POLR2EP19388 210 aaKnown RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 SERPINH1P50454 418 aaKnown RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 NDST1P52848 882 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 ACTN3Q08043 901 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 FSCN1Q16658 493 aaKnown RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 CBWD3Q5JTY5 395 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 CBWD5Q5RIA9 395 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 GALNT18Q6P9A2 607 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 TMEM154Q6P9G4 183 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 MIER2Q8N344 545 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 SH2D3CQ8N5H7 860 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 BEND7Q8N7W2 519 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 SUSD6Q92537 303 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 ZKSCAN4Q969J2 545 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 ZNF558Q96NG5 402 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 TBL1YQ9BQ87 522 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 CELF4Q9BZC1 486 aaKnown RBP10.94□□□□□ -0.66
ACTN1-216ENST00000556083 KCNK4Q9NYG8 393 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 USE1Q9NZ43 259 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 GIT1Q9Y2X7 761 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 SNCAIPQ9Y6H5 919 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 SMIM31A0A1B0GVY4 71 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 SIGLEC16A6NMB1 481 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 NFIBO00712 420 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 LDLRP01130 860 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ITGA2P17301 1181 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 PAICSP22234 425 aaKnown RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 KLRC2P26717 231 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TTPAP49638 278 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ATP6V0D1P61421 351 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TSNQ15631 228 aaKnown RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TAB1Q15750 504 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 MEA1Q16626 185 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ZCWPW2Q504Y3 356 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 BRMS1LQ5PSV4 323 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 CASP12Q6UXS9 341 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 LPCAT2Q7L5N7 544 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 C12orf56Q8IXR9 622 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TMEM199Q8N511 208 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ZCCHC9Q8N567 271 aaKnown RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 KCTD14Q9BQ13 255 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TRMOQ9BU70 441 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 RCOR3Q9P2K3 495 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 SNX6Q9UNH7 406 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ARIH1Q9Y4X5 557 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 DISP2A7MBM2 1401 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 LDOC1O95751 146 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ECDO95905 644 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ANXA5P08758 320 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 PIK3R1P27986 724 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 NTSP30990 170 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TUBP50607 506 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 GYS2P54840 703 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 IL2P60568 153 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ERVK-24P63145 666 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms