RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 TRIM43BA6NCK2 446 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 NOP56O00567 594 aaKnown RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 TRIM38O00635 465 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 GCATO75600 419 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 RNASEH2AO75792 299 aaKnown RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 STBD1O95210 358 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 EPHA3P29320 983 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 NDST2P52849 883 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 BCAR1P56945 870 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 MS4A2Q01362 244 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 ART3Q13508 389 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 RSBN1LQ6PCB5 846 aaPredicted RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 PODNQ7Z5L7 613 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 BRSK2Q8IWQ3 736 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 MPP5Q8N3R9 675 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 CNTD1Q8N815 330 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 ZNF781Q8N8C0 355 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 TDRD5Q8NAT2 981 aaKnown RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 ZNF420Q8TAQ5 688 aaPredicted RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 SYTL5Q8TDW5 730 aaPredicted RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 CLEC4DQ8WXI8 215 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 KLHL32Q96NJ5 620 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 PEBP4Q96S96 227 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 CNPY3Q9BT09 278 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 HAPLN2Q9GZV7 340 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 EFCAB1Q9HAE3 211 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 MAN1C1Q9NR34 630 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 TMEM216Q9P0N5 145 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 GABBR1Q9UBS5 961 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 IPO11Q9UI26 975 aaKnown RBP7.97□□□□□ -1.13
CHD8-209ENST00000555935 SERPINA10Q9UK55 444 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 ADAM28Q9UKQ2 775 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 PACSIN3Q9UKS6 424 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 COQ6Q9Y2Z9 468 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 FADS3Q9Y5Q0 445 aa7.97□□□□□ -1.13
CHD8-209ENST00000555935 GOLGA8QA0A0J9YX86 632 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 A0A1B0GTW7 788 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 FUOMA2VDF0 154 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 GOLGA8OA6NCC3 632 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 TMEM247A6NEH6 219 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 GOLGA8NF8WBI6 632 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 NFIBO00712 420 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 PRPSAP2O60256 369 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 ESRRBO95718 433 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 OATP04181 439 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 MCF2P10911 925 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 TYK2P29597 1187 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 PKNOX1P55347 436 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 TGFB2P61812 414 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 SEMA5AQ13591 1074 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 PGM5Q15124 567 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 TGFBIQ15582 683 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 SLC9A4Q6AI14 798 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 CLVS1Q8IUQ0 354 aaPredicted RBP7.96□□□□□ -1.14
CHD8-209ENST00000555935 FIBCD1Q8N539 461 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 DDHD1Q8NEL9 900 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 TNIP2Q8NFZ5 429 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 ISL2Q96A47 359 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 RCN3Q96D15 328 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 ASB9Q96DX5 294 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 MASTLQ96GX5 879 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 ZNF512Q96ME7 567 aaPredicted RBP7.96□□□□□ -1.14
CHD8-209ENST00000555935 OR52B2Q96RD2 323 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 WRNIP1Q96S55 665 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 CPXM1Q96SM3 734 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 TMEM79Q9BSE2 394 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 NAT9Q9BTE0 207 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 ILKAPQ9H0C8 392 aaPredicted RBP7.96□□□□□ -1.14
CHD8-209ENST00000555935 CCDC68Q9H2F9 335 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 RNPEPQ9H4A4 650 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 ZNF385DQ9H6B1 395 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 COQ10BQ9H8M1 238 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.96□□□□□ -1.14
CHD8-209ENST00000555935 PRDM16Q9HAZ2 1276 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 SUCOQ9UBS9 1254 aaKnown RBP7.96□□□□□ -1.14
CHD8-209ENST00000555935 CYTH4Q9UIA0 394 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 MID2Q9UJV3 735 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 AP4S1Q9Y587 144 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 SCN4AP35499 1836 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 SOBPA7XYQ1 873 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 ZNF487B1APH4 448 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 SLCO1B7G3V0H7 640 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 K7ERI5 159 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 FBP2O00757 339 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 HDAC3O15379 428 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 CST3P01034 146 aaPredicted RBP7.96□□□□□ -1.14
CHD8-209ENST00000555935 ERBB2P04626 1255 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 OCM2P0CE71 109 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 OCMP0CE72 109 aaPredicted RBP7.96□□□□□ -1.14
CHD8-209ENST00000555935 ENO3P13929 434 aaPredicted RBP7.96□□□□□ -1.14
CHD8-209ENST00000555935 CD19P15391 556 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 YBX3P16989 372 aaKnown RBP eCLIP7.96□□□□□ -1.143e-7■□□□□ 10.3
CHD8-209ENST00000555935 PTPN1P18031 435 aaKnown RBP7.96□□□□□ -1.14
CHD8-209ENST00000555935 PGAM1P18669 254 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 GPD1P21695 349 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 HALP42357 657 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 PTGER2P43116 358 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 MAGEA12P43365 314 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 NAMPTP43490 491 aa7.96□□□□□ -1.14
CHD8-209ENST00000555935 PSMD8P48556 350 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms