RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZFXP17010 805 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-221ENST00000555773 RHOQP17081 205 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 GOT1P17174 413 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 CASQ1P31415 396 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 MARCKSL1P49006 195 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 CDH4P55283 916 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 OXCT1P55809 520 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 AMPD2Q01433 879 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 TDGQ13569 410 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 RUNX3Q13761 415 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 DPYSL3Q14195 570 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 PPP2R5EQ16537 467 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 TFDP3Q5H9I0 405 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 LY6G5CQ5SRR4 150 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 ARTNQ5T4W7 220 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 PAPD7Q5XG87 772 aaKnown RBP12.85□□□□□ -0.35
SHMT2-221ENST00000555773 RNF43Q68DV7 783 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 RWDD4Q6NW29 188 aaKnown RBP12.85□□□□□ -0.35
SHMT2-221ENST00000555773 SPOCD1Q6ZMY3 1216 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 TPGS1Q6ZTW0 290 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 RFX8Q6ZV50 586 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 CHST9Q7L1S5 443 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 CCDC117Q8IWD4 279 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-221ENST00000555773 ST13P5Q8NFI4 369 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-221ENST00000555773 IGSF8Q969P0 613 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 CSPG4P5Q96PW8 444 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 RNF157Q96PX1 679 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 SLC2A11Q9BYW1 496 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 EBF3Q9H4W6 596 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 ECT2Q9H8V3 914 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 PRUNE2Q8WUY3 3088 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 DENND4CQ5VZ89 1909 aa12.85□□□□□ -0.35
SHMT2-221ENST00000555773 DOCK8Q8NF50 2099 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-221ENST00000555773 A0A1B0GVM2 712 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 TCAF2A6NFQ2 919 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ESPNB1AK53 854 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ARNTLO00327 626 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 CES2O00748 559 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 TRDMT1O14717 391 aaKnown RBP12.84□□□□□ -0.35
SHMT2-221ENST00000555773 TBL1XO60907 577 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
SHMT2-221ENST00000555773 CD48P09326 243 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 PYGMP11217 842 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ARSAP15289 507 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 TCP1P17987 556 aaKnown RBP12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ERCC2P18074 760 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 PTPN7P35236 360 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 GGCXP38435 758 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 CDKN2BP42772 138 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 MAPKAPK2P49137 400 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 RPS24P62847 133 aaKnown RBP12.84□□□□□ -0.35
SHMT2-221ENST00000555773 PFKPQ01813 784 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ZNF177Q13360 481 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-221ENST00000555773 DPYSQ14117 519 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 TFDP2Q14188 446 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ANO4Q32M45 955 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ITPRIPL2Q3MIP1 535 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ANKRD20A8PQ5CZ79 823 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 FYB2Q5VWT5 728 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 TRIM68Q6AZZ1 485 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 MFSD7Q6UXD7 560 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 CCDC50Q8IVM0 306 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 LZTR1Q8N653 840 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 CSGALNACT1Q8TDX6 532 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 MYEOVQ96EZ4 313 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ASIC4Q96FT7 647 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 ZFYVE19Q96K21 471 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 C16orf45Q96MC5 204 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-221ENST00000555773 PRICKLE1Q96MT3 831 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-221ENST00000555773 XPO6Q96QU8 1125 aaKnown RBP12.84□□□□□ -0.35
SHMT2-221ENST00000555773 BBS2Q9BXC9 721 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 HPS4Q9NQG7 708 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 KLHL11Q9NVR0 708 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 TMEM248Q9NWD8 314 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 DNAI1Q9UI46 699 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 SNX12Q9UMY4 172 aa12.84□□□□□ -0.35
SHMT2-221ENST00000555773 EYSQ5T1H1 3165 aa12.83□□□□□ -0.35
SHMT2-221ENST00000555773 OBSL1O75147 1896 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 NEDD8-MDP1E9PL57 170 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-221ENST00000555773 CNTN5O94779 1100 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 CYP17A1P05093 508 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 ADH5P11766 374 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 TYRP14679 529 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 GLULP15104 373 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 AMPD1P23109 780 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 DNA2P51530 1060 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 VCPP55072 806 aaKnown RBP12.83□□□□□ -0.36
SHMT2-221ENST00000555773 PREPLQ4J6C6 727 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-221ENST00000555773 C6orf118Q5T5N4 469 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 SYT10Q6XYQ8 523 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 SETD3Q86TU7 594 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-221ENST00000555773 NLRP14Q86W24 1093 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 CFAP52Q8N1V2 620 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 RTL3Q8N8U3 475 aaKnown RBP12.83□□□□□ -0.36
SHMT2-221ENST00000555773 PCDH19Q8TAB3 1148 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 FIBINQ8TAL6 211 aa12.83□□□□□ -0.36
SHMT2-221ENST00000555773 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms