RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SIN3BO75182 1162 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 DDNO94850 711 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 C6orf222P0C671 652 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 LCP1P13796 627 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ACAT1P24752 427 aaKnown RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 TYK2P29597 1187 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 HOXA11P31270 313 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 SULT1E1P49888 294 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 IDH3AP50213 366 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 SERPINB8P50452 374 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 PRKAA2P54646 552 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ZNF792Q3KQV3 632 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 FBXO47Q5MNV8 452 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 C16orf46Q6P387 395 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 MAMDC4Q6UXC1 1216 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ZCCHC23Q6ZST2 131 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 RASSF3Q86WH2 238 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ARHGAP18Q8N392 663 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 FBXO27Q8NI29 283 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 RNF139Q8WU17 664 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 IFT43Q96FT9 208 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 CERS2Q96G23 380 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ZMAT2Q96NC0 199 aaKnown RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ECSITQ9BQ95 431 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 YIPF3Q9GZM5 350 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 SSX2IPQ9Y2D8 614 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 PCDHB12Q9Y5F1 795 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 WASF2Q9Y6W5 498 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 KPNA7A9QM74 516 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 MFSD11O43934 449 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 CYP2C9P11712 490 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 CPA3P15088 417 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 HCAR3P49019 387 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ZNF135P52742 658 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ATXN1P54253 815 aaKnown RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 SESN2P58004 480 aaPredicted RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 UBAP2LQ14157 1087 aaKnown RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 LCA5Q86VQ0 697 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 CLEC4CQ8WTT0 213 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 KCTD13Q8WZ19 329 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 PPP1R16BQ96T49 567 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 SORT1Q99523 831 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 TRIM56Q9BRZ2 755 aaKnown RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ADAMTS10Q9H324 1103 aa16.59■□□□□ 0.25
TUBB3-209ENST00000555609 ADARB2Q9NS39 739 aaKnown RBP16.59■□□□□ 0.25
TUBB3-209ENST00000555609 OTOFQ9HC10 1997 aa16.58■□□□□ 0.25
TUBB3-209ENST00000555609 ZNF195O14628 629 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 PPEF2O14830 753 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 SMIM24O75264 130 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 PRKCGP05129 697 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 APOA4P06727 396 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 DNAJB1P25685 340 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 DNAJB2P25686 324 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 ADORA2BP29275 332 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 CACNA2D1P54289 1103 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 CSE1LP55060 971 aaKnown RBP16.58■□□□□ 0.24
TUBB3-209ENST00000555609 CCNA1P78396 465 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 MARCH8Q5T0T0 291 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 DPY19L2Q6NUT2 758 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 C10orf107Q8IVU9 208 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 DEFB106AQ8N104 65 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 ZFAND2BQ8WV99 257 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 UCMAQ8WVF2 138 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 KBTBD7Q8WVZ9 684 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 LGMNQ99538 433 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 RBBP8Q99708 897 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 HNRNPABQ99729 332 aaKnown RBP16.58■□□□□ 0.24
TUBB3-209ENST00000555609 DPEP3Q9H4B8 488 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 TUBGCP4Q9UGJ1 667 aa16.58■□□□□ 0.24
TUBB3-209ENST00000555609 USP1O94782 785 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 KCNA4P22459 653 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 WARSP23381 471 aaKnown RBP16.57■□□□□ 0.24
TUBB3-209ENST00000555609 ADORA2AP29274 412 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 LIMK2P53671 638 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 DPYSQ14117 519 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 SV2CQ496J9 727 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 MDH1BQ5I0G3 518 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 PDPK2PQ6A1A2 396 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 CATSPER4Q7RTX7 472 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 NME8Q8N427 588 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 APPL2Q8NEU8 664 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 ZNF483Q8TF39 744 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-209ENST00000555609 LRRN4Q8WUT4 740 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 NTAN1Q96AB6 310 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 PGBD4Q96DM1 585 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 NPY6RQ99463 290 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 DUSP16Q9BY84 665 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 SYBUQ9NX95 663 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 BFARQ9NZS9 450 aa16.57■□□□□ 0.24
TUBB3-209ENST00000555609 SLC22A2O15244 555 aa16.56■□□□□ 0.24
TUBB3-209ENST00000555609 TIMM44O43615 452 aa16.56■□□□□ 0.24
TUBB3-209ENST00000555609 LYPLA1O75608 230 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-209ENST00000555609 AP2A1O95782 977 aa16.56■□□□□ 0.24
TUBB3-209ENST00000555609 KCNE1P15382 129 aa16.56■□□□□ 0.24
TUBB3-209ENST00000555609 PSMB4P28070 264 aa16.56■□□□□ 0.24
TUBB3-209ENST00000555609 NPY2RP49146 381 aa16.56■□□□□ 0.24
TUBB3-209ENST00000555609 TAF6P49848 677 aa16.56■□□□□ 0.24
TUBB3-209ENST00000555609 XKR4Q5GH76 650 aa16.56■□□□□ 0.24
TUBB3-209ENST00000555609 MAP3K21Q5TCX8 1036 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms