RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 UCHL3P15374 230 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 CYP11B1P15538 503 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 GNSP15586 552 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 CSKP41240 450 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 NOVA1P51513 510 aaKnown RBP25.3■■□□□ 1.64
PRKCH-216ENST00000555542 SLC6A3Q01959 620 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 PTPN20Q4JDL3 420 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 TAF3Q5VWG9 929 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 PSAPL1Q6NUJ1 521 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 OLFML1Q6UWY5 402 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 NUP58Q9BVL2 599 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 VPS16Q9H269 839 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 FBRSQ9HAH7 460 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 SUSD2Q9UGT4 822 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 SUN2Q9UH99 717 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 PI4KAP42356 2102 aa25.3■■□□□ 1.64
PRKCH-216ENST00000555542 DAB1O75553 588 aa25.29■■□□□ 1.64
PRKCH-216ENST00000555542 ASLP04424 464 aa25.29■■□□□ 1.64
PRKCH-216ENST00000555542 MMS22LQ6ZRQ5 1243 aa25.29■■□□□ 1.64
PRKCH-216ENST00000555542 ZDHHC17Q8IUH5 632 aa25.29■■□□□ 1.64
PRKCH-216ENST00000555542 KIAA1522Q9P206 1035 aaPredicted RBP25.29■■□□□ 1.64
PRKCH-216ENST00000555542 ADAMTS9Q9P2N4 1935 aa25.29■■□□□ 1.64
PRKCH-216ENST00000555542 GON4LQ3T8J9 2241 aa25.29■■□□□ 1.64
PRKCH-216ENST00000555542 FAM170AA1A519 330 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 DNTTP04053 509 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 MAOBP27338 520 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 RNASE9P60153 205 aaKnown RBP25.28■■□□□ 1.64
PRKCH-216ENST00000555542 PLEKHG6Q3KR16 790 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 FSCBQ5H9T9 825 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 PITRM1Q5JRX3 1037 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 RABGAP1LQ5R372 815 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 FKBP15Q5T1M5 1219 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 RNF219Q5W0B1 726 aaPredicted RBP25.28■■□□□ 1.64
PRKCH-216ENST00000555542 SLC26A9Q7LBE3 791 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 TTC17Q96AE7 1141 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 MIR1-1HGQ9H1L0 117 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 PRSS16Q9NQE7 514 aa25.28■■□□□ 1.64
PRKCH-216ENST00000555542 M0QYT0 321 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 SYPP08247 313 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 NOS2P35228 1153 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 TTC31Q49AM3 519 aaPredicted RBP25.27■■□□□ 1.64
PRKCH-216ENST00000555542 N4BP2L1Q5TBK1 243 aaPredicted RBP25.27■■□□□ 1.64
PRKCH-216ENST00000555542 SH3PXD2AQ5TCZ1 1133 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 DPY19L2P1Q6NXN4 242 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 HDDC3Q8N4P3 179 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 MSANTD4Q8NCY6 345 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 CADM4Q8NFZ8 388 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 LMLNQ96KR4 655 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 STK33Q9BYT3 514 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 ANO10Q9NW15 660 aa25.27■■□□□ 1.64
PRKCH-216ENST00000555542 INTS6Q9UL03 887 aaKnown RBP25.27■■□□□ 1.64
PRKCH-216ENST00000555542 SPTBN2O15020 2390 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 F8VZ95 297 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 MTA1Q13330 715 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 KRT31Q15323 416 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 TTC39BQ5VTQ0 682 aaPredicted RBP25.26■■□□□ 1.63
PRKCH-216ENST00000555542 DCAF12L1Q5VU92 463 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 ZNF776Q68DI1 518 aaPredicted RBP25.26■■□□□ 1.63
PRKCH-216ENST00000555542 ERICH1Q86X53 443 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 CIR1Q86X95 450 aaPredicted RBP25.26■■□□□ 1.63
PRKCH-216ENST00000555542 ANKRD20A12PQ8NF67 263 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 SNX19Q92543 992 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 RPRD1AQ96P16 312 aaPredicted RBP25.26■■□□□ 1.63
PRKCH-216ENST00000555542 NAA15Q9BXJ9 866 aaKnown RBP25.26■■□□□ 1.63
PRKCH-216ENST00000555542 CAPN10Q9HC96 672 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 STAP1Q9ULZ2 295 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 ERVW-1Q9UQF0 538 aa25.26■■□□□ 1.63
PRKCH-216ENST00000555542 RNASEH1O60930 286 aaKnown RBP25.25■■□□□ 1.63
PRKCH-216ENST00000555542 IGLV3-19P01714 112 aa25.25■■□□□ 1.63
PRKCH-216ENST00000555542 MATKP42679 507 aa25.25■■□□□ 1.63
PRKCH-216ENST00000555542 SULT1E1P49888 294 aa25.25■■□□□ 1.63
PRKCH-216ENST00000555542 RPS14P62263 151 aaKnown RBP25.25■■□□□ 1.63
PRKCH-216ENST00000555542 EIF4EBP2Q13542 120 aaPredicted RBP25.25■■□□□ 1.63
PRKCH-216ENST00000555542 STX1AQ16623 288 aa25.25■■□□□ 1.63
PRKCH-216ENST00000555542 FAM102AQ5T9C2 384 aaPredicted RBP25.25■■□□□ 1.63
PRKCH-216ENST00000555542 CDKAL1Q5VV42 579 aa25.25■■□□□ 1.63
PRKCH-216ENST00000555542 RBM43Q6ZSC3 357 aaKnown RBP25.25■■□□□ 1.63
PRKCH-216ENST00000555542 SND1Q7KZF4 910 aaKnown RBP eCLIP25.25■■□□□ 1.63
PRKCH-216ENST00000555542 CCAR2Q8N163 923 aaKnown RBP25.25■■□□□ 1.63
PRKCH-216ENST00000555542 ZNF397Q8NF99 534 aaPredicted RBP25.25■■□□□ 1.63
PRKCH-216ENST00000555542 GANCQ8TET4 914 aa25.25■■□□□ 1.63
PRKCH-216ENST00000555542 C18orf8Q96DM3 657 aa25.25■■□□□ 1.63
PRKCH-216ENST00000555542 PCMTD1Q96MG8 357 aaPredicted RBP25.25■■□□□ 1.63
PRKCH-216ENST00000555542 MTG2Q9H4K7 406 aa25.25■■□□□ 1.63
PRKCH-216ENST00000555542 FANCLQ9NW38 375 aa25.25■■□□□ 1.63
PRKCH-216ENST00000555542 RRN3Q9NYV6 651 aa25.25■■□□□ 1.63
PRKCH-216ENST00000555542 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.25■■□□□ 1.63
PRKCH-216ENST00000555542 A0A1B0GVM2 712 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 TCAF2A6NFQ2 919 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 ARHGAP33O14559 1287 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 OPHN1O60890 802 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 SRPRAP08240 638 aaKnown RBP25.24■■□□□ 1.63
PRKCH-216ENST00000555542 PDGFRAP16234 1089 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 CDH5P33151 784 aaPredicted RBP25.24■■□□□ 1.63
PRKCH-216ENST00000555542 CTSOP43234 321 aaPredicted RBP25.24■■□□□ 1.63
PRKCH-216ENST00000555542 NUMBP49757 651 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 ECT2LQ008S8 904 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 ZBTB16Q05516 673 aa25.24■■□□□ 1.63
PRKCH-216ENST00000555542 NOP9Q86U38 636 aaKnown RBP25.24■■□□□ 1.63
PRKCH-216ENST00000555542 DHX40Q8IX18 779 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms