RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 C3orf20Q8ND61 904 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 FAM76AQ8TAV0 307 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 CASKIN2Q8WXE0 1202 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 SEC14L1Q92503 715 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 PLD4Q96BZ4 506 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 FAM83CQ9BQN1 747 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 ADAM33Q9BZ11 813 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 DCLK3Q9C098 648 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 RAB6CQ9H0N0 254 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 THAP2Q9H0W7 228 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 ECT2Q9H8V3 914 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 ARHGEF3Q9NR81 526 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 SLC2A4RGQ9NR83 387 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 ASNSD1Q9NWL6 643 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 WDR35Q9P2L0 1181 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 TBC1D14Q9P2M4 693 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 XPO7Q9UIA9 1087 aaKnown RBP10.21□□□□□ -0.78
PSEN1-213ENST00000555386 AGO1Q9UL18 857 aaKnown RBP10.21□□□□□ -0.78
PSEN1-213ENST00000555386 STAP1Q9ULZ2 295 aa10.21□□□□□ -0.78
PSEN1-213ENST00000555386 HBS1LQ9Y450 684 aaKnown RBP10.21□□□□□ -0.78
PSEN1-213ENST00000555386 WDFY4Q6ZS81 3184 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 GOLGA6L10A0A0M3HER8 536 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 GOLGA6CA6NDK9 693 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 TMEM221A6NGB7 291 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 ERICH4A6NGS2 130 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 NEDD8-MDP1E9PL57 170 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 PI4K2BG5E9Z4 385 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 M0R296 226 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 ARNTLO00327 626 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 DDX3YO15523 660 aaKnown RBP10.2□□□□□ -0.78
PSEN1-213ENST00000555386 IRAK2O43187 625 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 NFATC1O95644 943 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 APOEP02649 317 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 CYP17A1P05093 508 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 GOLGA6DP0CG33 693 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 GPD1P21695 349 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 SDC4P31431 198 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 HSPA9P38646 679 aaKnown RBP10.2□□□□□ -0.78
PSEN1-213ENST00000555386 CARSP49589 748 aaKnown RBP10.2□□□□□ -0.78
PSEN1-213ENST00000555386 GYS2P54840 703 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 SIGLEC14Q08ET2 396 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 UBXN2BQ14CS0 331 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 DHCR24Q15392 516 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 MLF2Q15773 248 aaPredicted RBP10.2□□□□□ -0.78
PSEN1-213ENST00000555386 CFAP58Q5T655 872 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 SCYL2Q6P3W7 929 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 LRIG3Q6UXM1 1119 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 HTR3DQ70Z44 454 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 FAM131BQ86XD5 332 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 ADGRG2Q8IZP9 1017 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 IQCKQ8N0W5 287 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 UBL4BQ8N7F7 174 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 DNASE1L2Q92874 299 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 LRRC45Q96CN5 670 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 ARHGEF26Q96DR7 871 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 MS4A3Q96HJ5 214 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 BTBD6Q96KE9 485 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 FCRL2Q96LA5 508 aaPredicted RBP10.2□□□□□ -0.78
PSEN1-213ENST00000555386 GDAP1L1Q96MZ0 367 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 DDX23Q9BUQ8 820 aaKnown RBP10.2□□□□□ -0.78
PSEN1-213ENST00000555386 FOXQ1Q9C009 403 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 TRIM7Q9C029 511 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 SIK2Q9H0K1 926 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 TMPRSS4Q9NRS4 437 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 PIGVQ9NUD9 493 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 PARVAQ9NVD7 372 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.2□□□□□ -0.78
PSEN1-213ENST00000555386 GOLGA6AQ9NYA3 693 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 NFU1Q9UMS0 254 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 TLR6Q9Y2C9 796 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 SNX10Q9Y5X0 201 aa10.2□□□□□ -0.78
PSEN1-213ENST00000555386 C2CD4BA6NLJ0 364 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 SIGLEC16A6NMB1 481 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 TMEM110-MUSTN1A8MSY1 372 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 SPECC1L-ADORA2AF8WAN1 911 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 GREM1O60565 184 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 SHOX2O60902 331 aaPredicted RBP10.19□□□□□ -0.78
PSEN1-213ENST00000555386 ADH1CP00326 375 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 ADH5P11766 374 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 TCF3P15923 654 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 PSMA2P25787 234 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 SCNN1AP37088 669 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 SLC6A11P48066 632 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 SLC11A2P49281 568 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 KDSRQ06136 332 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 NR1H3Q13133 447 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 MAMLD1Q13495 774 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 PON2Q15165 354 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 ZSCAN26Q16670 478 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 SLC25A52Q3SY17 297 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 CCDC14Q49A88 953 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 SPDYCQ5MJ68 293 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 OTUD1Q5VV17 481 aaPredicted RBP10.19□□□□□ -0.78
PSEN1-213ENST00000555386 RAP1GAP2Q684P5 730 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 NUGGCQ68CJ6 796 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 PPP1R2P3Q6NXS1 205 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 RHBDF2Q6PJF5 856 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 TXNDC11Q6PKC3 985 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 Q6ZNB5 142 aa10.19□□□□□ -0.78
PSEN1-213ENST00000555386 BEND5Q7L4P6 421 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms