RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SERPINA13PQ6UXR4 307 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 ASCL5Q7RTU5 278 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 ZNF571Q7Z3V5 609 aaPredicted RBP12.5□□□□□ -0.41
SRP54-206ENST00000555317 C11orf74Q86VG3 221 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 FAM131BQ86XD5 332 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 MCOLN2Q8IZK6 566 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.5□□□□□ -0.41
SRP54-206ENST00000555317 FIBINQ8TAL6 211 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 GAB3Q8WWW8 586 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 SYN2Q92777 582 aaPredicted RBP12.5□□□□□ -0.41
SRP54-206ENST00000555317 NT5C3BQ969T7 300 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 TRIM11Q96F44 468 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 VCPIP1Q96JH7 1222 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 MCEEQ96PE7 176 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 PPP1R9BQ96SB3 815 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 TPSD1Q9BZJ3 242 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 ARHGEF38Q9NXL2 777 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 KIAA1522Q9P206 1035 aaPredicted RBP12.5□□□□□ -0.41
SRP54-206ENST00000555317 THAP10Q9P2Z0 257 aaPredicted RBP12.5□□□□□ -0.41
SRP54-206ENST00000555317 VANGL2Q9ULK5 521 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 CAPN11Q9UMQ6 739 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 HS3ST4Q9Y661 456 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 STON1Q9Y6Q2 735 aa12.5□□□□□ -0.41
SRP54-206ENST00000555317 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.49□□□□□ -0.41
SRP54-206ENST00000555317 C2CD4BA6NLJ0 364 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 SIGLEC16A6NMB1 481 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 GJB6O95452 261 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 SERPING1P05155 500 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 GZMAP12544 262 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 TFE3P19532 575 aaPredicted RBP12.49□□□□□ -0.41
SRP54-206ENST00000555317 CD70P32970 193 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 PTPN9P43378 593 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 ST8SIA6P61647 398 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 LMAN2Q12907 356 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 PTP4A2Q12974 167 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 SRSF5Q13243 272 aaKnown RBP12.49□□□□□ -0.41
SRP54-206ENST00000555317 ZNF177Q13360 481 aaPredicted RBP12.49□□□□□ -0.41
SRP54-206ENST00000555317 ZNF234Q14588 700 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 LPAL2Q16609 132 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 C15orf59Q2T9L4 293 aaPredicted RBP12.49□□□□□ -0.41
SRP54-206ENST00000555317 E4F1Q66K89 784 aaPredicted RBP12.49□□□□□ -0.41
SRP54-206ENST00000555317 MBLAC2Q68D91 279 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 LAIR1Q6GTX8 287 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 FBXL22Q6P050 247 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 CIR1Q86X95 450 aaPredicted RBP12.49□□□□□ -0.41
SRP54-206ENST00000555317 MDGA1Q8NFP4 955 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 FAM172AQ8WUF8 416 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 SORCS1Q8WY21 1168 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 ERLEC1Q96DZ1 483 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 ACOX2Q99424 681 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 PRMT1Q99873 361 aaKnown RBP12.49□□□□□ -0.41
SRP54-206ENST00000555317 GABRG3Q99928 467 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 PARVAQ9NVD7 372 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 ZNHIT6Q9NWK9 470 aaKnown RBP12.49□□□□□ -0.41
SRP54-206ENST00000555317 TAS2R14Q9NYV8 317 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 CALCOCO1Q9P1Z2 691 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 RAD54BQ9Y620 910 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 RALGAPA1Q6GYQ0 2036 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 EML5Q05BV3 1969 aa12.49□□□□□ -0.41
SRP54-206ENST00000555317 MAP3K13O43283 966 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 HRO43593 1189 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 RTN2O75298 545 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 CLDN11O75508 207 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 FTLP02792 175 aaPredicted RBP12.48□□□□□ -0.41
SRP54-206ENST00000555317 ASLP04424 464 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 GYPCP04921 128 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 EPHX1P07099 455 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 DLDP09622 509 aaKnown RBP12.48□□□□□ -0.41
SRP54-206ENST00000555317 MYBL1P10243 752 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
SRP54-206ENST00000555317 RRM1P23921 792 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 HOXC13P31276 330 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 CASP14P31944 242 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 RFC1P35251 1148 aaPredicted RBP12.48□□□□□ -0.41
SRP54-206ENST00000555317 GGCXP38435 758 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 CSKP41240 450 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 IL12RB1P42701 662 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 ATXN1P54253 815 aaKnown RBP12.48□□□□□ -0.41
SRP54-206ENST00000555317 SLC12A1Q13621 1099 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 ELF2Q15723 593 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 FUT11Q495W5 492 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 CCDC14Q49A88 953 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 RNF43Q68DV7 783 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 TRNP1Q6NT89 227 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 STRADAQ7RTN6 431 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 ADIPOR2Q86V24 386 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 RASSF3Q86WH2 238 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 CCAR2Q8N163 923 aaKnown RBP12.48□□□□□ -0.41
SRP54-206ENST00000555317 JOSD2Q8TAC2 188 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 WFDC5Q8TCV5 224 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 CYB5D2Q8WUJ1 264 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 RUBCNQ92622 972 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 ZNF653Q96CK0 615 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 MYEOVQ96EZ4 313 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 HAPLN3Q96S86 360 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 SYT11Q9BT88 431 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 ADAM33Q9BZ11 813 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 TRIM5Q9C035 493 aa12.48□□□□□ -0.41
SRP54-206ENST00000555317 SCINQ9Y6U3 715 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms