RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CRATP43155 626 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 POU5F1Q01860 360 aaKnown RBP7.02□□□□□ -1.29
SYNE2-216ENST00000555002 SMIM5Q71RC9 77 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 SUSD6Q92537 303 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 MRGBPQ9NV56 204 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 HEY2Q9UBP5 337 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 VANGL2Q9ULK5 521 aa7.02□□□□□ -1.29
SYNE2-216ENST00000555002 SMCO3A2RU48 225 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 TPH1P17752 444 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ITIH2P19823 946 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 POLD2P49005 469 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF579Q8NAF0 562 aaKnown RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 MKNK1Q9BUB5 465 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CHMP1AQ9HD42 196 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CCT8L1PA6NM43 557 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 C19orf81C9J6K1 198 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 WRBO00258 174 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 IGSF6O95976 241 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CCND1P24385 295 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 BTN3A2P78410 334 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 MTF1Q14872 753 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 FAM171A1Q5VUB5 890 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 PARGQ86W56 976 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF655Q8N720 491 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 INTS10Q9NVR2 710 aaKnown RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF70Q9UC06 446 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 AP4E1Q9UPM8 1137 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 UBE2QL1A1L167 161 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 SERPINA3P01011 423 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 MPOP05164 745 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CLCN3P51790 818 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 MCCD1P59942 119 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CYP4F2P78329 520 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CYP4F3Q08477 520 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ULK2Q8IYT8 1036 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 LPAR1Q92633 364 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CENPIQ92674 756 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 PDP2Q9P2J9 529 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 GULP1Q9UBP9 304 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 OR5F1O95221 314 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CBX5P45973 191 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 AMIGO1Q86WK6 493 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 SPATA4Q8NEY3 305 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 FAR1Q8WVX9 515 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 PAIP1Q9H074 479 aaKnown RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 SEMA6AQ9H2E6 1030 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 OGDHLQ9ULD0 1010 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 RAD51CO43502 376 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 STX11O75558 287 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 THRAP10827 490 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 H2AFXP16104 143 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 TUBP50607 506 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ATXN1P54253 815 aaKnown RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CUL2Q13617 745 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 RAET1GQ6H3X3 334 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ATG9AQ7Z3C6 839 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ATCAYQ86WG3 371 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 RASGEF1AQ8N9B8 481 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 GDPD5Q8WTR4 605 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 MYOCQ99972 504 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 TBL1YQ9BQ87 522 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CDADC1Q9BWV3 514 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 STARD7Q9NQZ5 370 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF608Q9ULD9 1512 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 WDR27A2RRH5 827 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CHRNGP07510 517 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CCDC166P0CW27 439 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 TPBGLP0DKB5 382 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 VHLP40337 213 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ILDR2Q71H61 639 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 A1CFQ9NQ94 594 aaKnown RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 MYH3P11055 1940 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 SAMD9Q5K651 1589 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 PDE9AO76083 593 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 RBP1P09455 135 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 RBP3P10745 1247 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 DGCR6Q14129 220 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 C4orf46Q504U0 113 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF470Q6ECI4 717 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 C11orf63Q6NUN7 778 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CRTC3Q6UUV7 619 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 LPCAT2Q7L5N7 544 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 SAMD3Q8N6K7 520 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 PPP1R13LQ8WUF5 828 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 NRDE2Q9H7Z3 1164 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CD3EAPO15446 510 aaKnown RBP7.01□□□□□ -1.29
SYNE2-216ENST00000555002 BGNP21810 368 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 KCNA5P22460 613 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 SLC22A9Q8IVM8 553 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ATG4AQ8WYN0 398 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 GPER1Q99527 375 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 TBC1D13Q9NVG8 400 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF232Q9UNY5 417 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 PCDHGB3Q9Y5G1 929 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 RP1P56715 2156 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 RGS14O43566 566 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 NR3C2P08235 984 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 BNC1Q01954 994 aa7.01□□□□□ -1.29
SYNE2-216ENST00000555002 CES5AQ6NT32 575 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms