RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 KIAA1522Q9P206 1035 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-207ENST00000554677 STIM2Q9P246 746 aa12.69□□□□□ -0.38
MTHFD1-207ENST00000554677 SUN2Q9UH99 717 aa12.69□□□□□ -0.38
MTHFD1-207ENST00000554677 CYTH4Q9UIA0 394 aa12.69□□□□□ -0.38
MTHFD1-207ENST00000554677 XPO7Q9UIA9 1087 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-207ENST00000554677 NAALADL1Q9UQQ1 740 aa12.69□□□□□ -0.38
MTHFD1-207ENST00000554677 PCDHGB2Q9Y5G2 931 aa12.69□□□□□ -0.38
MTHFD1-207ENST00000554677 SNX11Q9Y5W9 270 aa12.69□□□□□ -0.38
MTHFD1-207ENST00000554677 LOC400499M0QZD8 3231 aa12.69□□□□□ -0.38
MTHFD1-207ENST00000554677 ITPR1Q14643 2758 aa12.69□□□□□ -0.38
MTHFD1-207ENST00000554677 GOLGA6L4A6NEF3 574 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 KCNK3O14649 394 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 FBXO21O94952 628 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 SEMA4FO95754 770 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 CER1O95813 267 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 ATP5BP06576 529 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 HOXB3P14651 431 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 POLR2EP19388 210 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 SLC11A2P49281 568 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 GCNT1Q02742 428 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 KCNH2Q12809 1159 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 EIF4EBP2Q13542 120 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 MORC3Q14149 939 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 CCDC40Q4G0X9 1142 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 KLHL10Q6JEL2 608 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 DENND1BQ6P3S1 775 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 IL27RAQ6UWB1 636 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 MMS22LQ6ZRQ5 1243 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 TRIM59Q8IWR1 403 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 ADAM32Q8TC27 787 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 SETD7Q8WTS6 366 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 NELFBQ8WX92 580 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 SLC4A5Q9BY07 1137 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 BTBD1Q9H0C5 482 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 NUCKS1Q9H1E3 243 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 RSPH9Q9H1X1 276 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 EBF2Q9HAK2 575 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 TM9SF3Q9HD45 589 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 TLR6Q9Y2C9 796 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 BTBD3Q9Y2F9 522 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 ANKRD6Q9Y2G4 727 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 MYLKQ15746 1914 aa12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 TDRD6O60522 2096 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-207ENST00000554677 SIN3BO75182 1162 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 IGHV4-34P06331 123 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 ATXN1LP0C7T5 689 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 CSKP41240 450 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 CTSOP43234 321 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 AFF3P51826 1226 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 MARSP56192 900 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 SCAPQ12770 1279 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 NNTQ13423 1086 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 STIM1Q13586 685 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 ARID5BQ14865 1188 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 HNRNPA1L2Q32P51 320 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 DCAF6Q58WW2 860 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 MS4A13Q5J8X5 152 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 C9orf64Q5T6V5 341 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 ZNF776Q68DI1 518 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 LRSAM1Q6UWE0 723 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 LAYNQ6UX15 382 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 BEND5Q7L4P6 421 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 PROSER1Q86XN7 944 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 MFN1Q8IWA4 741 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 CFAP52Q8N1V2 620 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 HJURPQ8NCD3 748 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 SNX19Q92543 992 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 FAM129BQ96TA1 746 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 SGK2Q9HBY8 427 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 SERGEFQ9UGK8 458 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 APOBEC2Q9Y235 224 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 BPTFQ12830 3046 aa12.67□□□□□ -0.38
MTHFD1-207ENST00000554677 TTC34A8MYJ7 566 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 PAPSS1O43252 624 aaPredicted RBP12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 FSBPO95073 299 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 IGLV3-25P01717 112 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 DNTTP04053 509 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 CD27P26842 260 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 PPP1R2P41236 205 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 GRIA4P48058 902 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 GALCP54803 685 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 STX17P56962 302 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 PITX1P78337 314 aaPredicted RBP12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 PITRM1Q5JRX3 1037 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 USP30Q70CQ3 517 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 TMEM110Q86TL2 294 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 TAC4Q86UU9 113 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 APCDD1Q8J025 514 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 CARNMT1Q8N4J0 409 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 KDM1BQ8NB78 822 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 RHBDD1Q8TEB9 315 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 ZNF606Q8WXB4 792 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 GOLGA1Q92805 767 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 SERPINB11Q96P15 392 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 NEUROG2Q9H2A3 272 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 PABPC3Q9H361 631 aaKnown RBP12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 ACP6Q9NPH0 428 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 TJP2Q9UDY2 1190 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 SLCO3A1Q9UIG8 710 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms