RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 MZB1Q8WU39 189 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 HMGB4Q8WW32 186 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 DRC1Q96MC2 740 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 JMJD8Q96S16 334 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 PNKPQ96T60 521 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 SLC12A9Q9BXP2 914 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 BACH2Q9BYV9 841 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 ZDHHC5Q9C0B5 715 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 TMEM60Q9H2L4 133 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 ZCCHC4Q9H5U6 513 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 FSCN3Q9NQT6 498 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 PRR13Q9NZ81 148 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 SUSD2Q9UGT4 822 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 MAGED2Q9UNF1 606 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-229ENST00000554672 DNM3Q9UQ16 869 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 RAI2Q9Y5P3 530 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 COL4A2P08572 1712 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 GREB1Q4ZG55 1949 aa5.17□□□□□ -1.58
ATXN3-229ENST00000554672 RALGAPA1Q6GYQ0 2036 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TCRBV21S2A2A0A5A6 115 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 E9PAM4 449 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 CYB561D2O14569 222 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 SLC9A3R1O14745 358 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 CAPN9O14815 690 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 SLC16A4O15374 487 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 PFKFB2O60825 505 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 CBFA2T3O75081 653 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 HIP1RO75146 1068 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 ZNF217O75362 1048 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 NOL4O94818 638 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 KAT7O95251 611 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 PRB1P04280 392 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 APODP05090 189 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 MSL3P1P0C860 447 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 CXCL8P10145 99 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 PFKLP17858 780 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 MCM7P33993 719 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 EIF2DP41214 584 aaKnown RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 MATR3P43243 847 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 ABCG1P45844 678 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 SLC6A11P48066 632 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 PDE6CP51160 858 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 GUCY2FP51841 1108 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 PMS1P54277 932 aaKnown RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TSPY1Q01534 308 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 MVKQ03426 396 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 SCRN1Q12765 414 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 ORC2Q13416 577 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 PDIA5Q14554 519 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 PLEKHG6Q3KR16 790 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 WDR45BQ5MNZ6 344 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 SYCP2LQ5T4T6 812 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 EMC10Q5UCC4 262 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TDRD10Q5VZ19 366 aaKnown RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 C9orf57Q5W0N0 161 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TRMT11Q7Z4G4 463 aaKnown RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 DAW1Q8N136 415 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 GALNT15Q8N3T1 639 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 DEFB119Q8N690 84 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 ARL14EPQ8N8R7 260 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TRIML1Q8N9V2 468 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 OR2I1PQ8NGU4 316 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 SPATA18Q8TC71 538 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 SETD7Q8WTS6 366 aaKnown RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TRMT2BQ96GJ1 504 aaKnown RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 ZNF419Q96HQ0 510 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 SLC22A12Q96S37 553 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 CDC6Q99741 560 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 PI4K2AQ9BTU6 479 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TIPINQ9BVW5 301 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TM6SF1Q9BZW5 370 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 RPF1Q9H9Y2 349 aaKnown RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TRPC7Q9HCX4 862 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TNFRSF12AQ9NP84 129 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 PDRG1Q9NUG6 133 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 GCNT4Q9P109 453 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 IMPACTQ9P2X3 320 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 ORC3Q9UBD5 711 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 ARHGAP26Q9UNA1 814 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 DERAQ9Y315 318 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 ATXN2Q99700 1313 aaKnown RBP5.16□□□□□ -1.58
ATXN3-229ENST00000554672 ASXL3Q9C0F0 2248 aa5.16□□□□□ -1.58
ATXN3-229ENST00000554672 TDRD15B5MCY1 1934 aaKnown RBP5.15□□□□□ -1.58
ATXN3-229ENST00000554672 ANO9A1A5B4 782 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 TBC1D3BA6NDS4 549 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 ANTXRLA6NF34 631 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-229ENST00000554672 H0Y8X5 98 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 H0YCG3 227 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 J3QKU1 62 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 PPEF2O14830 753 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 EPB41L2O43491 1005 aaKnown RBP5.15□□□□□ -1.59
ATXN3-229ENST00000554672 NDUFS2O75306 463 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 TADA3O75528 432 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 C1QL1O75973 258 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 REC8O95072 547 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 CTDNEP1O95476 244 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 MPOP05164 745 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 GSNP06396 782 aa5.15□□□□□ -1.59
ATXN3-229ENST00000554672 OR52Z1P0C646 297 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms