RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 DOCK9Q9BZ29 2069 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 CACNA1GO43497 2377 aa11.03□□□□□ -0.64
SHMT2-213ENST00000554600 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 LRP3O75074 770 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 PAGE1O75459 146 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 CYP1A1P04798 512 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-213ENST00000554600 TFE3P19532 575 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-213ENST00000554600 PRKCHP24723 683 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 FLT3P36888 993 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 SCNN1AP37088 669 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 MPLP40238 635 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 ID4P47928 161 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 ST8SIA6P61647 398 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 RPL6Q02878 288 aaKnown RBP11.02□□□□□ -0.65
SHMT2-213ENST00000554600 MTA1Q13330 715 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 IQCB1Q15051 598 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 SF3A2Q15428 464 aaKnown RBP11.02□□□□□ -0.65
SHMT2-213ENST00000554600 FUT11Q495W5 492 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 AASDHQ4L235 1098 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-213ENST00000554600 RNF219Q5W0B1 726 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-213ENST00000554600 PMS2CLQ68D20 193 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 LPCAT2Q7L5N7 544 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 CYP2U1Q7Z449 544 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 ADIPOR2Q86V24 386 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 LUZP1Q86V48 1076 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 CIR1Q86X95 450 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-213ENST00000554600 TMEFF1Q8IYR6 380 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 DEFB119Q8N690 84 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 EMC1Q8N766 993 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.02□□□□□ -0.65
SHMT2-213ENST00000554600 OLIG1Q8TAK6 271 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 FIBINQ8TAL6 211 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 MRGPRX1Q96LB2 322 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 NAP1L5Q96NT1 182 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-213ENST00000554600 NPY6RQ99463 290 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 AGPAT1Q99943 283 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 FUCA2Q9BTY2 467 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 SMOC1Q9H4F8 434 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 PRDM16Q9HAZ2 1276 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 PIGVQ9NUD9 493 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 ADAM22Q9P0K1 906 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 KIAA1522Q9P206 1035 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-213ENST00000554600 VANGL2Q9ULK5 521 aa11.02□□□□□ -0.65
SHMT2-213ENST00000554600 A0A1B0GVM2 712 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 TCAF2A6NFQ2 919 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 NDUFS2O75306 463 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 ZNF217O75362 1048 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 ADCY5O95622 1261 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CAVIN2O95810 425 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 F9P00740 461 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CALB1P05937 261 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 DLDP09622 509 aaKnown RBP11.01□□□□□ -0.65
SHMT2-213ENST00000554600 ACADMP11310 421 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 TNFAIP3P21580 790 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 MMP8P22894 467 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CSKP41240 450 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 ATP11AP98196 1134 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CENPCQ03188 943 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 AUHQ13825 339 aaKnown RBP11.01□□□□□ -0.65
SHMT2-213ENST00000554600 ASIC2Q16515 512 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CSRP2Q16527 193 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CDO1Q16878 200 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 RSPO4Q2I0M5 234 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CLEC16AQ2KHT3 1053 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 MAP7D1Q3KQU3 841 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 ZSCAN23Q3MJ62 389 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 SLC25A52Q3SY17 297 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 FSCBQ5H9T9 825 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 PITRM1Q5JRX3 1037 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 BRMS1LQ5PSV4 323 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 OTUD1Q5VV17 481 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-213ENST00000554600 FBXL22Q6P050 247 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 PRR23CQ6ZRP0 262 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 TMPRSS6Q8IU80 811 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CCAR2Q8N163 923 aaKnown RBP11.01□□□□□ -0.65
SHMT2-213ENST00000554600 PIGKQ92643 395 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 PRCCQ92733 491 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-213ENST00000554600 SIPA1Q96FS4 1042 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CFAP57Q96MR6 1250 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 PCDHB18PQ96TA0 734 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 SELENOOQ9BVL4 669 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 TKTL2Q9H0I9 626 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 MBD1Q9UIS9 605 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CDV3Q9UKY7 258 aaKnown RBP11.01□□□□□ -0.65
SHMT2-213ENST00000554600 PCDHGA5Q9Y5G8 931 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 CHD5Q8TDI0 1954 aa11.01□□□□□ -0.65
SHMT2-213ENST00000554600 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 A0A1B0GTH6 734 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 BCLAF3A2AJT9 711 aaKnown RBP11□□□□□ -0.65
SHMT2-213ENST00000554600 ANKRD62A6NC57 917 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 LRRC53A6NM62 1247 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 PRR5-ARHGAP8B1AHC4 643 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 AP5Z1O43299 807 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 GJB6O95452 261 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 ASLP04424 464 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 ZNF806P0C7X5 589 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 PDGFRAP16234 1089 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 TGM1P22735 817 aa11□□□□□ -0.65
SHMT2-213ENST00000554600 SDC4P31431 198 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms