RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 CHSY1Q86X52 802 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 ERICH1Q86X53 443 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 LGI2Q8N0V4 545 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 CARNMT1Q8N4J0 409 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 KDM1BQ8NB78 822 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 MSANTD4Q8NCY6 345 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 OR2T3Q8NH03 318 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 WFDC5Q8TCV5 224 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 CYB5D2Q8WUJ1 264 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 SORCS1Q8WY21 1168 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 PRCCQ92733 491 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-213ENST00000554508 TCEAL3Q969E4 200 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 C18orf8Q96DM3 657 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 PRICKLE1Q96MT3 831 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-213ENST00000554508 PPP1R9BQ96SB3 815 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 BPIFA3Q9BQP9 254 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 EDEM2Q9BV94 578 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 MKRN2Q9H000 416 aaKnown RBP9.03□□□□□ -0.96
ACTN1-213ENST00000554508 NUCKS1Q9H1E3 243 aaKnown RBP9.03□□□□□ -0.96
ACTN1-213ENST00000554508 SLC6A17Q9H1V8 727 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 TSPY26PQ9H489 355 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 FAM204AQ9H8W3 233 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 TMEM9BQ9NQ34 198 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 RXFP3Q9NSD7 469 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 FANCLQ9NW38 375 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 DDIT4Q9NX09 232 aa9.03□□□□□ -0.96
ACTN1-213ENST00000554508 WSB2Q9NYS7 404 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-213ENST00000554508 USP36Q9P275 1121 aaKnown RBP9.03□□□□□ -0.96
ACTN1-213ENST00000554508 LIMA1Q9UHB6 759 aaKnown RBP9.03□□□□□ -0.96
ACTN1-213ENST00000554508 NYNRINQ9P2P1 1898 aaKnown RBP9.02□□□□□ -0.96
ACTN1-213ENST00000554508 LNP1A1A4G5 178 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 LRRC10BA6NIK2 292 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 SMTNL1A8MU46 457 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 F8VZ95 297 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 GRAP2O75791 330 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 LUC7L3O95232 432 aaKnown RBP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 F9P00740 461 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 IGLV3-19P01714 112 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 SRPRAP08240 638 aaKnown RBP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 SERPINF2P08697 491 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 HLA-EP13747 358 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 CDK11BP21127 795 aaKnown RBP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 PRKCHP24723 683 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 TPMTP51580 245 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 PITX1P78337 314 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 IRX4P78413 519 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 ZBTB16Q05516 673 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 SFSWAPQ12872 951 aaKnown RBP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 CDH18Q13634 790 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 TRIM61Q5EBN2 209 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 PPM1JQ5JR12 505 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 WDR45BQ5MNZ6 344 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 RABGAP1LQ5R372 815 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 ACBD5Q5T8D3 534 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 RAP1GAP2Q684P5 730 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 LRSAM1Q6UWE0 723 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 SND1Q7KZF4 910 aaKnown RBP eCLIP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 CFAP52Q8N1V2 620 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 DEFB119Q8N690 84 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 CADM4Q8NFZ8 388 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 ERLEC1Q96DZ1 483 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 PGAP3Q96FM1 320 aaPredicted RBP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 TOE1Q96GM8 510 aaKnown RBP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 PRMT1Q99873 361 aaKnown RBP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 NUP58Q9BVL2 599 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 GANQ9H2C0 597 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 TMEM74BQ9NUR3 256 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.02□□□□□ -0.97
ACTN1-213ENST00000554508 SUSD2Q9UGT4 822 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 STAP1Q9ULZ2 295 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 SLC6A14Q9UN76 642 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 PAXBP1Q9Y5B6 917 aa9.02□□□□□ -0.97
ACTN1-213ENST00000554508 SYNJ2BP-COX16A0A087WUM0 186 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 A0A1B0GVM2 712 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 MED19A0JLT2 244 aaPredicted RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 TARSL2A2RTX5 802 aaKnown RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 TCAF2A6NFQ2 919 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 C4orf47A7E2U8 309 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 PATE3B3GLJ2 98 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 M0QYT0 321 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 GNSP15586 552 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 SOX5P35711 763 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 NNMTP40261 264 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 CSKP41240 450 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 STAT1P42224 750 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 JAM2P57087 298 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 RNASE9P60153 205 aaKnown RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 POLR2FP61218 127 aaKnown RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 TPM4P67936 248 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 SULT2A1Q06520 285 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 NME3Q13232 169 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 ARID5BQ14865 1188 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 SLC25A52Q3SY17 297 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 FSCBQ5H9T9 825 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 PITRM1Q5JRX3 1037 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 BRMS1LQ5PSV4 323 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 TAF3Q5VWG9 929 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 ARCQ7LC44 396 aa9.01□□□□□ -0.97
ACTN1-213ENST00000554508 NOP9Q86U38 636 aaKnown RBP9.01□□□□□ -0.97
ACTN1-213ENST00000554508 LUZP1Q86V48 1076 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms