RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 RASA2Q15283 850 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 PARP6Q2NL67 630 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 PLEKHN1Q494U1 663 aaPredicted RBP6.2□□□□□ -1.42
VPS33B-203ENST00000554264 DCAF17Q5H9S7 520 aaPredicted RBP6.2□□□□□ -1.42
VPS33B-203ENST00000554264 TMEM63BQ5T3F8 832 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 TCERG1LQ5VWI1 586 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 HIBCHQ6NVY1 386 aaPredicted RBP6.2□□□□□ -1.42
VPS33B-203ENST00000554264 TLDC1Q6P9B6 456 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 CEP68Q76N32 757 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 LRRC8DQ7L1W4 858 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 ENOSF1Q7L5Y1 443 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 KCNK18Q7Z418 384 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 SESTD1Q86VW0 696 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 NELFCDQ8IXH7 590 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 ADGRF4Q8IZF3 695 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 SLC35G2Q8TBE7 412 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 ETNPPLQ8TBG4 499 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 ATP8B4Q8TF62 1192 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 CRYGNQ8WXF5 182 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 KIFAP3Q92845 792 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 ART4Q93070 314 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 MRPL38Q96DV4 380 aaKnown RBP6.2□□□□□ -1.42
VPS33B-203ENST00000554264 EEF2KMTQ96G04 330 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 TTC25Q96NG3 672 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 SCLT1Q96NL6 688 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 PRRX2Q99811 253 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 SELENOSQ9BQE4 189 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 ZSWIM1Q9BR11 485 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 SYT11Q9BT88 431 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 TUBB6Q9BUF5 446 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 AMNQ9BXJ7 453 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 AP1M1Q9BXS5 423 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 PACSIN1Q9BY11 444 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 BCAS3Q9H6U6 928 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 LRRC19Q9H756 370 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 PARVGQ9HBI0 331 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 SIX2Q9NPC8 291 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 TMEM260Q9NX78 707 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 NKIRAS1Q9NYS0 192 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 LGALS13Q9UHV8 139 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 PACSIN2Q9UNF0 486 aaPredicted RBP6.2□□□□□ -1.42
VPS33B-203ENST00000554264 C15orf41Q9Y2V0 281 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS33B-203ENST00000554264 INSL6Q9Y581 213 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 ADGRA3Q8IWK6 1321 aa6.2□□□□□ -1.42
VPS33B-203ENST00000554264 COL4A4P53420 1690 aaPredicted RBP6.2□□□□□ -1.42
VPS33B-203ENST00000554264 TRBV23-1A0A0A0MS06 115 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 C22orf46C9J442 243 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 E9PMD0 336 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 PPP1R12AO14974 1030 aaPredicted RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 RIPK2O43353 540 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 THAP12O43422 761 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 CDH16O75309 829 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 DCTN3O75935 186 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 AKAP3O75969 853 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 GCNT3O95395 438 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 VIMP08670 466 aaKnown RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 ABHD2P08910 425 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 MED14OSP0DP75 135 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 TXNP10599 105 aaKnown RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 NQO1P15559 274 aaKnown RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 SLC9A1P19634 815 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 CETN2P41208 172 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 MAPKAPK2P49137 400 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 DNA2P51530 1060 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 EPHB3P54753 998 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 NCKAP1LP55160 1127 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 RWDD2BP57060 319 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 RPL11P62913 178 aaKnown RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 DLG4P78352 724 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 IL9RQ01113 521 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 SPIRE1Q08AE8 756 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 IFRD2Q12894 506 aaPredicted RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 PTP4A2Q12974 167 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 STAT4Q14765 748 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 ATG14Q6ZNE5 492 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 RGS9BPQ6ZS82 235 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 KCTD1Q719H9 257 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 DPH6Q7L8W6 267 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 TMCO2Q7Z6W1 182 aaPredicted RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 SFR1Q86XK3 245 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 CATSPER3Q86XQ3 398 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 ADHFE1Q8IWW8 467 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 SCUBE1Q8IWY4 988 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 Q8N1Y9 231 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 DNERQ8NFT8 737 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 ZNF398Q8TD17 642 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 USP33Q8TEY7 942 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 INPP5DQ92835 1189 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 KISS1RQ969F8 398 aaPredicted RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 PABPC5Q96DU9 382 aaKnown RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 BORCS6Q96GS4 357 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 MAGEB18Q96M61 343 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 SAMD11Q96NU1 681 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 TMEM237Q96Q45 408 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 AGPAT1Q99943 283 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 REEP2Q9BRK0 252 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 INTS2Q9H0H0 1204 aaKnown RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 DPH5Q9H2P9 285 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 RANBP17Q9H2T7 1088 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms