RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 DMC1Q14565 340 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 HADHQ16836 314 aaKnown RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 USP41Q3LFD5 358 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 C1orf53Q5VUE5 145 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 E4F1Q66K89 784 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 DNAJB7Q7Z6W7 309 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 MRPL43Q8N983 215 aaKnown RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 MINDY2Q8NBR6 621 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 FAM216AQ8WUB2 273 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ASZ1Q8WWH4 475 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 HDAC2Q92769 488 aaKnown RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 VPS33AQ96AX1 596 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 BBS4Q96RK4 519 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 AGAP2Q99490 1192 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 SYT17Q9BSW7 474 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 MCMBPQ9BTE3 642 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 CPEB1Q9BZB8 566 aaKnown RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 KCNH7Q9NS40 1196 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 STAU2Q9NUL3 570 aaKnown RBP eCLIP4□□□□□ -1.77
LRFN5-204ENST00000554171 PCDHA6Q9UN73 950 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 TDRKHQ9Y2W6 561 aaKnown RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 PCDHA8Q9Y5H6 950 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 SLIT3O75094 1523 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 EFCAB6Q5THR3 1501 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 MED23Q9ULK4 1368 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 KIAA1551Q9HCM1 1747 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 UMODL1Q5DID0 1318 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 SALL3Q9BXA9 1300 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 CNTNAP2Q9UHC6 1331 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 PTPRTO14522 1441 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 KDM6AO15550 1401 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 VPS8Q8N3P4 1428 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 POLRMTO00411 1230 aaKnown RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 TSPAN9O75954 239 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 LDOC1O95751 146 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 SRGAP2CP0DJJ0 459 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 RFC1P35251 1148 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 LONP1P36776 959 aaKnown RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 RECQLP46063 649 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 TOB1P50616 345 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 BCAP31P51572 246 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 PPP2CBP62714 309 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 PPP2CAP67775 309 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 INSM1Q01101 510 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 DMP1Q13316 513 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 MAB21L1Q13394 359 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 PSMD6Q15008 389 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ZBTB6Q15916 424 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 DDR2Q16832 855 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 GALNTL6Q49A17 601 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 TEX30Q5JUR7 227 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 WSCD1Q658N2 575 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 CD300LGQ6UXG3 332 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ZNF783Q6ZMS7 281 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 CEP97Q8IW35 865 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 USHBP1Q8N6Y0 703 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 TRIB2Q92519 343 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ACSF2Q96CM8 615 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 RMDN1Q96DB5 314 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 PACSIN1Q9BY11 444 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 POLR1EQ9GZS1 481 aaKnown RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 RACGAP1Q9H0H5 632 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 PRDM13Q9H4Q3 707 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 PDZD7Q9H5P4 517 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ACTR5Q9H9F9 607 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 PNPLA8Q9NP80 782 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 PLCXD1Q9NUJ7 323 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 DENND2AQ9ULE3 1009 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 LIMCH1Q9UPQ0 1083 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 TNPO3Q9Y5L0 923 aaKnown RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 TEX51A0A1B0GUA7 166 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 E7ENQ6 273 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ZNF197O14709 1029 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 TO15178 435 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 DYNC1LI2O43237 492 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 HRO43593 1189 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ZNF821O75541 412 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 C22orf31O95567 290 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 CHGBP05060 677 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 NPTX2P47972 431 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 KCNJ5P48544 419 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ACTBP60709 375 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ACTA2P62736 377 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 TRA2BP62995 288 aaKnown RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 ACTG1P63261 375 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ACTG2P63267 376 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ACTC1P68032 377 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ACTA1P68133 377 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 POLD3Q15054 466 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 TMEM266Q2M3C6 531 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 NKAIN1Q4KMZ8 207 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 ACTBL2Q562R1 376 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 JADE1Q6IE81 842 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 THEM5Q8N1Q8 247 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 OR52M1Q8NGK5 317 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 CHPT1Q8WUD6 406 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 L3MBTL2Q969R5 705 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 CIDECQ96AQ7 238 aaPredicted RBP4□□□□□ -1.77
LRFN5-204ENST00000554171 NUF2Q9BZD4 464 aa4□□□□□ -1.77
LRFN5-204ENST00000554171 AP5M1Q9H0R1 490 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms