RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SLC52A2Q9HAB3 445 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 MAGEE1Q9HCI5 957 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 COMMD8Q9NX08 183 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 DNAJC28Q9NX36 388 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 PSME2Q9UL46 239 aa9.78□□□□□ -0.84
SIX4-202ENST00000554079 LOC100653049A0A140TA62 436 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 E9PMD0 336 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 CYB561D2O14569 222 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 COPEO14579 308 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 ACOT8O14734 319 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 SHOXO15266 292 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 EDIL3O43854 480 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 KRT34O76011 436 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 IL18RAPO95256 599 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 COL6A1P12109 1028 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 GZMAP12544 262 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 ETS1P14921 441 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 CFL1P23528 166 aaKnown RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 TBXAS1P24557 533 aaPredicted RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 PTGS2P35354 604 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 LEPRP48357 1165 aaKnown RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 TAGLNQ01995 201 aaKnown RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 GAD2Q05329 585 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 GPS1Q13098 491 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 ALCAMQ13740 583 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 HERC3Q15034 1050 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 CDK10Q15131 360 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 TBC1D10BQ4KMP7 808 aaPredicted RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 MSS51Q4VC12 460 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 NEK5Q6P3R8 708 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 GSTA5Q7RTV2 222 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 COLGALT2Q8IYK4 626 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 NPLOC4Q8TAT6 608 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 TBCKQ8TEA7 893 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 ZC3H15Q8WU90 426 aaKnown RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 SLC44A1Q8WWI5 657 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 HEMGNQ9BXL5 484 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 ZNF717Q9BY31 904 aaPredicted RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 MKRN2Q9H000 416 aaKnown RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.77□□□□□ -0.85
SIX4-202ENST00000554079 SYTL2Q9HCH5 934 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 POLE4Q9NR33 117 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 MOCS1Q9NZB8 636 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 SERPINA10Q9UK55 444 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 CFL2Q9Y281 166 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 PCDHB4Q9Y5E5 795 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 PCDHAC2Q9Y5I4 1007 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 COL16A1Q07092 1604 aaPredicted RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 LRRIQ4A6NIV6 560 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 EVPLLA8MZ36 301 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 VWA5AO00534 786 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 DLGAP1O14490 977 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 SNPHO15079 494 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 RFPL2O75678 378 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 B3GALNT1O75752 331 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 SEC14L2O76054 403 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 KCNK2O95069 426 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 BPGMP07738 259 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 GNAO1P09471 354 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 FOSL1P15407 271 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 FGFR3P22607 806 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 IDH3AP50213 366 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 ARSEP51690 589 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 KCNQ4P56696 695 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 KLF10Q13118 480 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 CEACAM7Q14002 265 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 GRM4Q14833 912 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 STK11Q15831 433 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 HIF1AQ16665 826 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 CBWD6Q4V339 395 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 CBWD3Q5JTY5 395 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 CBWD5Q5RIA9 395 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 FAM205BPQ63HN1 556 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 FAM122CQ6P4D5 195 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 BNC2Q6ZN30 1099 aaPredicted RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 KIAA0408Q6ZU52 694 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 KCTD20Q7Z5Y7 419 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 GPBP1Q86WP2 473 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 NUDCD3Q8IVD9 361 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 FAM109AQ8N4B1 249 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 S100ZQ8WXG8 99 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 DDX17Q92841 729 aaKnown RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 PMEPA1Q969W9 287 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 VPS33AQ96AX1 596 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 NAP1L4Q99733 375 aaKnown RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 SENP7Q9BQF6 1050 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 EFHD1Q9BUP0 239 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 TARS2Q9BW92 718 aaKnown RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 SEMA6AQ9H2E6 1030 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 PLEKHA5Q9HAU0 1116 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 IL17RBQ9NRM6 502 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 BMP2KQ9NSY1 1161 aaPredicted RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 POLHQ9Y253 713 aa9.77□□□□□ -0.85
SIX4-202ENST00000554079 FARP1Q9Y4F1 1045 aaPredicted RBP9.77□□□□□ -0.85
SIX4-202ENST00000554079 OR5K3A6NET4 321 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 E7ESA3 106 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 H0YIN7 160 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 ZNF195O14628 629 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 MTSS1O43312 755 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms