RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 INAFM1C9JVW0 142 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 TCERG1O14776 1098 aaKnown RBP2.67□□□□□ -1.98
SRP54-204ENST00000553923 MDM4O15151 490 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 ZNF500O60304 480 aaPredicted RBP2.67□□□□□ -1.98
SRP54-204ENST00000553923 CBFA2T3O75081 653 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 SOCS5O75159 536 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 TUSC2O75896 110 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 RASSF9O75901 435 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 TXNP10599 105 aaKnown RBP2.67□□□□□ -1.98
SRP54-204ENST00000553923 ACVR2AP27037 513 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 RBL1P28749 1068 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 VPS41P49754 854 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 ART1P52961 327 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 SUMO3P55854 103 aaPredicted RBP2.67□□□□□ -1.98
SRP54-204ENST00000553923 ROR2Q01974 943 aaKnown RBP2.67□□□□□ -1.98
SRP54-204ENST00000553923 SLC29A2Q14542 456 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 SF3B4Q15427 424 aaKnown RBP eCLIP2.67□□□□□ -1.986e-8■■■■□ 19.5
SRP54-204ENST00000553923 TMEM95Q3KNT9 176 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 WASHC2DQ5SRD0 308 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 C9orf57Q5W0N0 161 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 PLAG1Q6DJT9 500 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 ISM2Q6H9L7 571 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 XRRA1Q6P2D8 792 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 MAEAQ7L5Y9 396 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 EPM2AIP1Q7L775 607 aaPredicted RBP2.67□□□□□ -1.98
SRP54-204ENST00000553923 OVCH2Q7RTZ1 564 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 ARMC9Q7Z3E5 817 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 GPSM1Q86YR5 675 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 DDIASQ8IXT1 998 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 TEX19Q8NA77 164 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 SUN3Q8TAQ9 357 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 STK31Q9BXU1 1019 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 C22orf23Q9BZE7 217 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 TM6SF1Q9BZW5 370 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 CHST8Q9H2A9 424 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 MAP6D1Q9H9H5 199 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 PLAC1Q9HBJ0 212 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 SPAG4Q9NPE6 437 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 NLRC4Q9NPP4 1024 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 SACM1LQ9NTJ5 587 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.67□□□□□ -1.98
SRP54-204ENST00000553923 MID2Q9UJV3 735 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 UTS2RQ9UKP6 389 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 GTF2A1LQ9UNN4 478 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 A0A1B0GVY2 172 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 CAPN8A6NHC0 703 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 BTBD18B2RXH4 712 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 CCER2I3L3R5 266 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 RAB27BO00194 218 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 PIP5K1CO60331 668 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 CTNND1O60716 968 aaKnown RBP2.66□□□□□ -1.98
SRP54-204ENST00000553923 SNX2O60749 519 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 PQBP1O60828 265 aaKnown RBP2.66□□□□□ -1.98
SRP54-204ENST00000553923 SGPL1O95470 568 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 ENO1P06733 434 aaKnown RBP2.66□□□□□ -1.98
SRP54-204ENST00000553923 BRAFP15056 766 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 TPH1P17752 444 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 MAN1A1P33908 653 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 HTR3AP46098 478 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 GEMIN4P57678 1058 aaKnown RBP2.66□□□□□ -1.98
SRP54-204ENST00000553923 ABATP80404 500 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 DMWDQ09019 674 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 KIF5AQ12840 1032 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 GBX1Q14549 363 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 KCNAB1Q14722 419 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 MAPRE1Q15691 268 aaKnown RBP2.66□□□□□ -1.98
SRP54-204ENST00000553923 IZUMO4Q1ZYL8 232 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 PRAMEF19Q5SWL8 479 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 ZNF474Q6S9Z5 364 aaPredicted RBP2.66□□□□□ -1.98
SRP54-204ENST00000553923 CCDC149Q6ZUS6 474 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 C16orf82Q7Z2V1 217 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 CTU1Q7Z7A3 348 aaKnown RBP2.66□□□□□ -1.98
SRP54-204ENST00000553923 PCGF5Q86SE9 256 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 MYLK4Q86YV6 388 aaPredicted RBP2.66□□□□□ -1.98
SRP54-204ENST00000553923 RHPN2Q8IUC4 686 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 P3H2Q8IVL5 708 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 FAM186BQ8IYM0 893 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 MUC20Q8N307 709 aaPredicted RBP2.66□□□□□ -1.98
SRP54-204ENST00000553923 POF1BQ8WVV4 589 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 ZFPM2Q8WW38 1151 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 AKAP1Q92667 903 aaKnown RBP eCLIP2.66□□□□□ -1.98
SRP54-204ENST00000553923 RUNDC1Q96C34 613 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 MYD88Q99836 296 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 HERPUD2Q9BSE4 406 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 APOL5Q9BWW9 433 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 SEZ6LQ9BYH1 1024 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 ISCUQ9H1K1 167 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 AAMDCQ9H7C9 122 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 COL20A1Q9P218 1284 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 HDAC9Q9UKV0 1011 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 VPS4AQ9UN37 437 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 RPS6KL1Q9Y6S9 549 aa2.66□□□□□ -1.98
SRP54-204ENST00000553923 A0A0B4J293 547 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 CFAP69A5D8W1 941 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 BECN2A8MW95 431 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 SETSIPP0DME0 302 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 ZKSCAN1P17029 563 aaPredicted RBP2.65□□□□□ -1.99
SRP54-204ENST00000553923 NDUFS1P28331 727 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 PBX1P40424 430 aa2.65□□□□□ -1.99
SRP54-204ENST00000553923 RFX5P48382 616 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms