RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 CPNE8Q86YQ8 564 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 SLC44A2Q8IWA5 706 aaPredicted RBP4.15□□□□□ -1.75
RDH11-204ENST00000553578 TCEAL8Q8IYN2 117 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 ARHGAP24Q8N264 748 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 LSMEM1Q8N8F7 131 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 KCTD6Q8NC69 237 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 RNF169Q8NCN4 708 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 HIPK4Q8NE63 616 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 RASGRP4Q8TDF6 673 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 DIO2Q92813 273 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 MED15Q96RN5 788 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 PPP1R16BQ96T49 567 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 CIB1Q99828 191 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 AIFM2Q9BRQ8 373 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 PIMREGQ9BSJ6 248 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 STK33Q9BYT3 514 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 SHCBP1LQ9BZQ2 653 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 EHD1Q9H4M9 534 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 DNAJC18Q9H819 358 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 ZC4H2Q9NQZ6 224 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 MRPL39Q9NYK5 338 aaKnown RBP4.15□□□□□ -1.75
RDH11-204ENST00000553578 HERC5Q9UII4 1024 aaKnown RBP4.15□□□□□ -1.75
RDH11-204ENST00000553578 MSRAQ9UJ68 235 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 ADAMTS5Q9UNA0 930 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 CFL2Q9Y281 166 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 PCDHA1Q9Y5I3 950 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 RPTORQ8N122 1335 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 CCDC162PA2VCL2 907 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 KMOO15229 486 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 STRNO43815 780 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 APBB3O95704 486 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 TFRCP02786 760 aaKnown RBP4.15□□□□□ -1.75
RDH11-204ENST00000553578 GHRP10912 638 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 PFKFB1P16118 471 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 RAB6AP20340 208 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 PPM1AP35813 382 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 NR2C2P49116 596 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 ARL4DP49703 201 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 NDUFA8P51970 172 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 PLTPP55058 493 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 MYL6P60660 151 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 B2MP61769 119 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 ADAM17P78536 824 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 TUBB2AQ13885 445 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 PLCL1Q15111 1095 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 MED22Q15528 200 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 BCL2A1Q16548 175 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 NCAPH2Q6IBW4 605 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 OR52E8Q6IFG1 317 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 CXorf57Q6NSI4 855 aaKnown RBP4.15□□□□□ -1.75
RDH11-204ENST00000553578 C20orf204Q6ZNR8 217 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 RTN4RL1Q86UN2 441 aaPredicted RBP4.15□□□□□ -1.75
RDH11-204ENST00000553578 DENND1CQ8IV53 801 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 RTKN2Q8IZC4 609 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 CPA6Q8N4T0 437 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 C7orf31Q8N865 590 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 MLKLQ8NB16 471 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 NELFBQ8WX92 580 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 TTC9Q92623 222 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 RMDN1Q96DB5 314 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 GIMAP5Q96F15 307 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 TRMT2BQ96GJ1 504 aaKnown RBP4.15□□□□□ -1.75
RDH11-204ENST00000553578 MED30Q96HR3 178 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 FAM20AQ96MK3 541 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 NAPGQ99747 312 aaPredicted RBP4.15□□□□□ -1.75
RDH11-204ENST00000553578 MDFIQ99750 246 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 TUBB2BQ9BVA1 445 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 HERC2P3Q9BVR0 1158 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 DPH5Q9H2P9 285 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 MARCH7Q9H992 704 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 TUFT1Q9NNX1 390 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 C1orf112Q9NSG2 853 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 GIMAP4Q9NUV9 329 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 FAIMQ9NVQ4 179 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 TRNAU1APQ9NX07 287 aaKnown RBP4.15□□□□□ -1.75
RDH11-204ENST00000553578 FBXO10Q9UK96 956 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 GPR34Q9UPC5 381 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 RWDD3Q9Y3V2 267 aa4.15□□□□□ -1.75
RDH11-204ENST00000553578 COL11A1P12107 1806 aaPredicted RBP4.15□□□□□ -1.75
RDH11-204ENST00000553578 E9PMD0 336 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 PDE2AO00408 941 aaPredicted RBP4.14□□□□□ -1.75
RDH11-204ENST00000553578 PLOD2O00469 737 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 IFIT3O14879 490 aaKnown RBP4.14□□□□□ -1.75
RDH11-204ENST00000553578 FANCGO15287 622 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 HDAC3O15379 428 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 CNOT3O75175 753 aaKnown RBP4.14□□□□□ -1.75
RDH11-204ENST00000553578 NPPAP01160 153 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 HOXD8P13378 290 aaPredicted RBP4.14□□□□□ -1.75
RDH11-204ENST00000553578 TACR1P25103 407 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 RPS12P25398 132 aaKnown RBP4.14□□□□□ -1.75
RDH11-204ENST00000553578 KRT2P35908 639 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 COASYQ13057 564 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 GPR68Q15743 365 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 TMEM119Q4V9L6 283 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 GPATCH4Q5T3I0 446 aaKnown RBP4.14□□□□□ -1.75
RDH11-204ENST00000553578 TIGD7Q6NT04 549 aaPredicted RBP4.14□□□□□ -1.75
RDH11-204ENST00000553578 C6orf89Q6UWU4 347 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 TMC5Q6UXY8 1006 aa4.14□□□□□ -1.75
RDH11-204ENST00000553578 PXKQ7Z7A4 578 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms