RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 CSGALNACT1Q8TDX6 532 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 BHMTQ93088 406 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 CA14Q9ULX7 337 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 CHD5Q8TDI0 1954 aa15.32■□□□□ 0.04
MTHFD1-204ENST00000553405 A0A0A0MRY4 1105 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 C3orf70A6NLC5 250 aaPredicted RBP15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 USP27XA6NNY8 438 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 NRDCO43847 1150 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 TBL1XO60907 577 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 MARCKSL1P49006 195 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 PRKCQQ04759 706 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 NR1H3Q13133 447 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 ANO4Q32M45 955 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 FSCBQ5H9T9 825 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 TMEM196Q5HYL7 178 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 CHST9Q7L1S5 443 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 SFTPA1Q8IWL2 248 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 OR52K2Q8NGK3 314 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 MSANTD3Q96H12 275 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 RPRD1AQ96P16 312 aaPredicted RBP15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 TSGA10Q9BZW7 698 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 DHX35Q9H5Z1 703 aaKnown RBP15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 ZWILCHQ9H900 591 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 PCDH18Q9HCL0 1135 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 HCN2Q9UL51 889 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 TBC1D30Q9Y2I9 924 aa15.31■□□□□ 0.04
MTHFD1-204ENST00000553405 A0A1B0GVM2 712 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 ANTXRLA6NF34 631 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 TCAF2A6NFQ2 919 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 LUC7L3O95232 432 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 PDGFBP01127 241 aaPredicted RBP15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 CD48P09326 243 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 DESP17661 470 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 CD72P21854 359 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 HLA-FP30511 346 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 HCAR3P49019 387 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 PEX5P50542 639 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 GALK1P51570 392 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 DPYSQ14117 519 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 TAZQ16635 292 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 TTC39BQ5VTQ0 682 aaPredicted RBP15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 FSTL4Q6MZW2 842 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 TRIM67Q6ZTA4 783 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 TPRG1Q6ZUI0 275 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 ANKS1BQ7Z6G8 1248 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 NT5DC3Q86UY8 548 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 CCAR2Q8N163 923 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 SIX5Q8N196 739 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 NAT16Q8N8M0 369 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 FIBINQ8TAL6 211 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 DDI1Q8WTU0 396 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 RAPGEF5Q92565 580 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 KRT35Q92764 455 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 FAF2Q96CS3 445 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 ALG14Q96F25 216 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 SLC2A11Q9BYW1 496 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 KLC2Q9H0B6 622 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 KCND1Q9NSA2 647 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 NDFIP2Q9NV92 336 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 MPP6Q9NZW5 540 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 CWC15Q9P013 229 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 SLC27A6Q9Y2P4 619 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 OR51B4Q9Y5P0 310 aa15.3■□□□□ 0.04
MTHFD1-204ENST00000553405 ZDBF2Q9HCK1 2354 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 MUC22E2RYF6 1773 aaPredicted RBP15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 WASH4PA8MWX3 477 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 PSTPIP1O43586 416 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 KRT86O43790 486 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 SRGAP2O75044 1071 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 CLDN11O75508 207 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 PALMO75781 387 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 CYBBP04839 570 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 GOT1P17174 413 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 HTR7P34969 479 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 CDH4P55283 916 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 CCINQ13939 588 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 DPYSL3Q14195 570 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 HADHQ16836 314 aaKnown RBP15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 RABGAP1LQ5R372 815 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 TMEM215Q68D42 235 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 DAAM2Q86T65 1068 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 KIAA1524Q8TCG1 905 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 HSPH1Q92598 858 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 TBC1D31Q96DN5 1066 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 P2RY13Q9BPV8 354 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 ZYG11BQ9C0D3 744 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 NOL6Q9H6R4 1146 aaKnown RBP15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 C11orf16Q9NQ32 467 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 LZTFL1Q9NQ48 299 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 DNAJC17Q9NVM6 304 aaKnown RBP15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 KLHL11Q9NVR0 708 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 TMEM248Q9NWD8 314 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 STIM2Q9P246 746 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 INTS6Q9UL03 887 aaKnown RBP15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 GUCA1BQ9UMX6 200 aa15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 MTF2Q9Y483 593 aaPredicted RBP15.29■□□□□ 0.04
MTHFD1-204ENST00000553405 PRRT4C9JH25 899 aa15.28■□□□□ 0.04
MTHFD1-204ENST00000553405 K7EQS6 105 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms