RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 HEXIM2Q96MH2 286 aaKnown RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 TCEANC2Q96MN5 208 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 ZNF560Q96MR9 790 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 DNAJC7Q99615 494 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 DUSP23Q9BVJ7 150 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 TIPINQ9BVW5 301 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 TTLL2Q9BWV7 592 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 LSG1Q9H089 658 aaKnown RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 BHMT2Q9H2M3 363 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 BRMS1Q9HCU9 246 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 UBP1Q9NZI7 540 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 DKK3Q9UBP4 350 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 LRWD1Q9UFC0 647 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 CHORDC1Q9UHD1 332 aaPredicted RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 FBXO10Q9UK96 956 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 PHTF1Q9UMS5 762 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 DNM3Q9UQ16 869 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 PLAAQ9Y263 795 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 ZNF510Q9Y2H8 683 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 C2CD2Q9Y426 696 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 PCDHGA7Q9Y5G6 932 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 SLCO1B1Q9Y6L6 691 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 CEP192Q8TEP8 1941 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 ATMQ13315 3056 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 PCNX1Q96RV3 2341 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 FAM47DPA6NHR8 397 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 TRIM38O00635 465 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 SMAD7O15105 426 aaKnown RBP5.43□□□□□ -1.54
CKAP4-203ENST00000553039 SLC16A4O15374 487 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 PDPK1O15530 556 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 MED24O75448 989 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 TCEA3O75764 348 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 PF4P02776 101 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 PDGFRBP09619 1106 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 BDNFP23560 247 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 CHKAP35790 457 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 NUDT1P36639 197 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 DCTP40126 519 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 MASP1P48740 699 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 LIG4P49917 911 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 TUBP50607 506 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 CCR5P51681 352 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 NXPH1P58417 271 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 TYRO3Q06418 890 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 IFRD2Q12894 506 aaPredicted RBP5.43□□□□□ -1.54
CKAP4-203ENST00000553039 KCNAB2Q13303 367 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 EIF3IQ13347 325 aaKnown RBP5.43□□□□□ -1.54
CKAP4-203ENST00000553039 ZNF234Q14588 700 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 STAT4Q14765 748 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 SNX30Q5VWJ9 437 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 ERICH6BQ5W0A0 696 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 ZNF787Q6DD87 383 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 NAPEPLDQ6IQ20 393 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 LAYNQ6UX15 382 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 RBM44Q6ZP01 1051 aaKnown RBP5.43□□□□□ -1.54
CKAP4-203ENST00000553039 MAMDC2Q7Z304 686 aaPredicted RBP5.43□□□□□ -1.54
CKAP4-203ENST00000553039 TMC6Q7Z403 805 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 DSG4Q86SJ6 1040 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 PRPF39Q86UA1 669 aaKnown RBP5.43□□□□□ -1.54
CKAP4-203ENST00000553039 ZC3H18Q86VM9 953 aaKnown RBP5.43□□□□□ -1.54
CKAP4-203ENST00000553039 IQCHQ86VS3 1027 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 FBXL16Q8N461 479 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 PDCL2Q8N4E4 241 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 CELF2-AS1Q8N7Q2 184 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 OR4C6Q8NH72 309 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 BRF1Q92994 677 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 GTF3C6Q969F1 213 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 NKD1Q969G9 470 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 MIB2Q96AX9 1013 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 ANAPC16Q96DE5 110 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 ITPKCQ96DU7 683 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 ATXN7L3BQ96GX2 97 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 SERAC1Q96JX3 654 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 SLC6A18Q96N87 628 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 CATSPER2Q96P56 530 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 SLC2A11Q9BYW1 496 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 COMMD8Q9NX08 183 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 CDH9Q9ULB4 789 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 SNX14Q9Y5W7 946 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 ZNF638Q14966 1978 aaKnown RBP5.43□□□□□ -1.54
CKAP4-203ENST00000553039 PTPRJQ12913 1337 aa5.43□□□□□ -1.54
CKAP4-203ENST00000553039 NAV3Q8IVL0 2385 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 CCDC187A0A096LP49 1063 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 A0A1W2PR77 199 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 ESYT3A0FGR9 886 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 COCHO43405 550 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 NOBOXO60393 691 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 NEMFO60524 1076 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 HIP1RO75146 1068 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 S100BP04271 92 aaPredicted RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 WNT1P04628 370 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 CYBBP04839 570 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 IGHV4-34P06331 123 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 LIPCP11150 499 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 ACAT1P24752 427 aaKnown RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 PDIA3P30101 505 aaKnown RBP5.42□□□□□ -1.54
CKAP4-203ENST00000553039 CDC25AP30304 524 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 SLC5A2P31639 672 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 ABCD1P33897 745 aa5.42□□□□□ -1.54
CKAP4-203ENST00000553039 ATP5C1P36542 298 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms