RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 SPATC1Q76KD6 591 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 TRAPPC11Q7Z392 1133 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 OSTM1Q86WC4 334 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 ELOA2Q8IYF1 753 aaPredicted RBP5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 FAM186BQ8IYM0 893 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 OR10T2Q8NGX3 314 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 FNIP1Q8TF40 1166 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 CACTINQ8WUQ7 758 aaKnown RBP5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 ATXN2LQ8WWM7 1075 aaKnown RBP5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 NELFBQ8WX92 580 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 CASP10Q92851 521 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 BORCS6Q96GS4 357 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 HPDLQ96IR7 371 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 ANKRD36BP1Q96IX9 119 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 PGLYRP2Q96PD5 576 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 MED15Q96RN5 788 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 FNBP1Q96RU3 617 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 CDCA3Q99618 268 aaPredicted RBP5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 RTP3Q9BQQ7 232 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 S1PR5Q9H228 398 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 KIAA1586Q9HCI6 787 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 PARD6AQ9NPB6 346 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 FBXL5Q9UKA1 691 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 ITGA11Q9UKX5 1188 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 L1RE1Q9UN81 338 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 SSX2IPQ9Y2D8 614 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 FRMD4BQ9Y2L6 1034 aa5.95□□□□□ -1.46
SMARCC2-213ENST00000552627 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 WDR27A2RRH5 827 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 KPNA7A9QM74 516 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 PSMA7O14818 248 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 FFAR3O14843 346 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 HGSO14964 777 aaPredicted RBP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 CCL16O15467 120 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 NCK2O43639 380 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 TBC1D4O60343 1298 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 TRIM13O60858 407 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SOAT2O75908 522 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SEC24AO95486 1093 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 VNN2O95498 520 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SRGAP2BP0DMP2 458 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 ODC1P11926 461 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 ACAT1P24752 427 aaKnown RBP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 CCNE1P24864 410 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 PSMC2P35998 433 aaKnown RBP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 VAMP7P51809 220 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 NTHL1P78549 312 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 RBP5P82980 135 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 CBX1P83916 185 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 POU5F1Q01860 360 aaKnown RBP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 CREMQ03060 361 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 YWHAHQ04917 246 aaPredicted RBP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 PPP3CAQ08209 521 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SMAD4Q13485 552 aaKnown RBP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SURF1Q15526 300 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 EDRF1Q3B7T1 1238 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 DPCR1Q3MIW9 517 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 COBLL1Q53SF7 1204 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 DCAF17Q5H9S7 520 aaPredicted RBP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SPOPLQ6IQ16 392 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 ZNF280DQ6N043 979 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 TTI2Q6NXR4 508 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 LILRA6Q6PI73 481 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 TMEM184AQ6ZMB5 413 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SCARA5Q6ZMJ2 495 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 USP37Q86T82 979 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 TTC9BQ8N6N2 239 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SMRP1Q8NCR6 262 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 STKLD1Q8NE28 680 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 APPL2Q8NEU8 664 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SLC7A14Q8TBB6 771 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 PARD3BQ8TEW8 1205 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 DHTKD1Q96HY7 919 aaPredicted RBP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 ZNF560Q96MR9 790 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 KCNC2Q96PR1 638 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 TSPAN18Q96SJ8 248 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 TSG101Q99816 390 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 MRPL45Q9BRJ2 306 aaKnown RBP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 PI4K2AQ9BTU6 479 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 EPB41L1Q9H4G0 881 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SFXN1Q9H9B4 322 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 GEMIN8Q9NWZ8 242 aaKnown RBP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 FNIP2Q9P278 1114 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 STK39Q9UEW8 545 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 PFDN2Q9UHV9 154 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 FBXW11Q9UKB1 542 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 NME7Q9Y5B8 376 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 SNX9Q9Y5X1 595 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 TTC28Q96AY4 2481 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 C5orf42Q9H799 3197 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 CUL9Q8IWT3 2517 aa5.94□□□□□ -1.46
SMARCC2-213ENST00000552627 DOCK6Q96HP0 2047 aa5.93□□□□□ -1.46
SMARCC2-213ENST00000552627 CCDC195A0A1B0GUA6 201 aa5.93□□□□□ -1.46
SMARCC2-213ENST00000552627 H7C4K7 107 aa5.93□□□□□ -1.46
SMARCC2-213ENST00000552627 CETN3O15182 167 aa5.93□□□□□ -1.46
SMARCC2-213ENST00000552627 HUS1O60921 280 aa5.93□□□□□ -1.46
SMARCC2-213ENST00000552627 ATP2C2O75185 946 aa5.93□□□□□ -1.46
SMARCC2-213ENST00000552627 OAZ2O95190 189 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms