RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 AURKCQ9UQB9 309 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 LIPT1Q9Y234 373 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 PAXBP1Q9Y5B6 917 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 FPGT-TNNI3KV9GXZ4 949 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 A0A0G2JPF8 293 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 LRRD1A4D1F6 860 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 HNRNPCL3B7ZW38 293 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 TNPO2O14787 897 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 ZNF623O75123 536 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 PEX11AO75192 247 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 ABHD16AO95870 558 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 IFNB1P01574 187 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 TFRCP02786 760 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 HMOX1P09601 288 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 FTH1P19P0C7X4 201 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 HNRNPCL4P0DMR1 293 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 CPA1P15085 419 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 TYMPP19971 482 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 CPT2P23786 658 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 PTAFRP25105 342 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 KLRC1P26715 233 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 IL1R2P27930 398 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 PPARGP37231 505 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 IL15P40933 162 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 PIP4K2AP48426 406 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 LUMP51884 338 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 POLGP54098 1239 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 NRG3P56975 720 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 EIF4A1P60842 406 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 MGAT5Q09328 741 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 RALGDSQ12967 914 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 TARDBPQ13148 414 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP44-208ENST00000552440 RAB32Q13637 225 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 IRF3Q14653 427 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 PPP1R7Q15435 360 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 TRADDQ15628 312 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 NFIL3Q16649 462 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 EMC10Q5UCC4 262 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 KANK2Q63ZY3 851 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 VASNQ6EMK4 673 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 FAM111BQ6SJ93 734 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 SUSD1Q6UWL2 747 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 ANGPTL8Q6UXH0 198 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 C15orf52Q6ZUT6 534 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 SYT13Q7L8C5 426 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 ADGRG6Q86SQ4 1221 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 LINC00346Q8IVM7 164 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 ADGRF2Q8IZF7 708 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 CNTROBQ8N137 903 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 VPS52Q8N1B4 723 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 CCDC148Q8NFR7 591 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 SETD6Q8TBK2 473 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 MR1Q95460 341 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 SLC22A18Q96BI1 424 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 MBD6Q96DN6 1003 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 GCNAQ96QF7 691 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 AGAP2Q99490 1192 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 LBHD1Q9BQE6 289 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 ZPBPQ9BS86 351 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 HSD3B7Q9H2F3 369 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 MRPL46Q9H2W6 279 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 ST6GALNAC4Q9H4F1 302 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 SLITRK6Q9H5Y7 841 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 VEZTQ9HBM0 779 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 PFDN4Q9NQP4 134 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 ARHGEF3Q9NR81 526 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 RBM28Q9NW13 759 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 CNOT7Q9UIV1 285 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 PTBP2Q9UKA9 531 aaKnown RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 ADAM29Q9UKF5 820 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 ZMYND8Q9ULU4 1186 aaPredicted RBP4.42□□□□□ -1.7
USP44-208ENST00000552440 CA14Q9ULX7 337 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 TMED5Q9Y3A6 229 aa4.42□□□□□ -1.7
USP44-208ENST00000552440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP44-208ENST00000552440 ERCC6Q03468 1493 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 RAD54L2Q9Y4B4 1467 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 IGSF1Q8N6C5 1336 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 ARPC4-TTLL3A0A0A6YYG9 625 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 A0A1W2PRV1 198 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 MBD3L4A6NDZ8 208 aaPredicted RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 MBD3L3A6NE82 208 aaPredicted RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 LACTBL1A8MY62 500 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 PATE3B3GLJ2 98 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 DNM1LO00429 736 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 TSPAN4O14817 238 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 ZNF263O14978 683 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 TGFB1I1O43294 461 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 CCP110O43303 1012 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 RRP9O43818 475 aaKnown RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 B4GALT4O60513 344 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 GUCY1B2O75343 617 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 PDE8BO95263 885 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 TRIM16O95361 564 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 C22orf31O95567 290 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 ADCY5O95622 1261 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 AHSGP02765 367 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 GAAP10253 952 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 PECAM1P16284 738 aaPredicted RBP4.41□□□□□ -1.7
USP44-208ENST00000552440 CCNA2P20248 432 aa4.41□□□□□ -1.7
USP44-208ENST00000552440 SAT1P21673 171 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms