RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 SLC6A4P31645 630 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 SFSWAPQ12872 951 aaKnown RBP16.96■□□□□ 0.31
RAB5C-209ENST00000552162 ADAM9Q13443 819 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 CST6Q15828 149 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 HNRNPA1L2Q32P51 320 aaKnown RBP16.96■□□□□ 0.31
RAB5C-209ENST00000552162 SGO2Q562F6 1265 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 FAM133BQ5BKY9 247 aaKnown RBP16.96■□□□□ 0.31
RAB5C-209ENST00000552162 HES3Q5TGS1 186 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 ATL3Q6DD88 541 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 DHX40Q8IX18 779 aaKnown RBP16.96■□□□□ 0.31
RAB5C-209ENST00000552162 EID2Q8N6I1 236 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 CCDC47Q96A33 483 aaKnown RBP16.96■□□□□ 0.31
RAB5C-209ENST00000552162 IRX2Q9BZI1 471 aaPredicted RBP16.96■□□□□ 0.31
RAB5C-209ENST00000552162 GDF3Q9NR23 364 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 STIM2Q9P246 746 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 CFAP45Q9UL16 551 aa16.96■□□□□ 0.31
RAB5C-209ENST00000552162 GOLGA6L7A0A1B0GV03 622 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 RRP8O43159 456 aaKnown RBP16.95■□□□□ 0.3
RAB5C-209ENST00000552162 IRAK2O43187 625 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 IGLV3-27P01718 113 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 ASLP04424 464 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 PRR29P0C7W0 189 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 CD19P15391 556 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 EPHA8P29322 1005 aaPredicted RBP16.95■□□□□ 0.3
RAB5C-209ENST00000552162 CSKP41240 450 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 SLC11A2P49281 568 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 DAOAP59103 153 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 DNM1Q05193 864 aaKnown RBP16.95■□□□□ 0.3
RAB5C-209ENST00000552162 TARDBPQ13148 414 aaKnown RBP eCLIP16.95■□□□□ 0.3
RAB5C-209ENST00000552162 KCNJ12Q14500 433 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 NUGGCQ68CJ6 796 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 MSANTD2Q6P1R3 559 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 MMAAQ8IVH4 418 aaKnown RBP16.95■□□□□ 0.3
RAB5C-209ENST00000552162 HJURPQ8NCD3 748 aaPredicted RBP16.95■□□□□ 0.3
RAB5C-209ENST00000552162 OR2T34Q8NGX1 318 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 UBA3Q8TBC4 463 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 KCTD13Q8WZ19 329 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 TTC17Q96AE7 1141 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 LMLNQ96KR4 655 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 MRGPRX3Q96LB0 322 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 PRICKLE1Q96MT3 831 aaPredicted RBP16.95■□□□□ 0.3
RAB5C-209ENST00000552162 FCRL3Q96P31 734 aaPredicted RBP16.95■□□□□ 0.3
RAB5C-209ENST00000552162 OMDQ99983 421 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 NRSN2Q9GZP1 204 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 NEUROG2Q9H2A3 272 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 CNGB3Q9NQW8 809 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 ADAMTS1Q9UHI8 967 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 FZD4Q9ULV1 537 aa16.95■□□□□ 0.3
RAB5C-209ENST00000552162 A0A1W2PR77 199 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 WNT9AO14904 365 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 ACSL4O60488 711 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 STX10O60499 249 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 SETSIPP0DME0 302 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 LCP1P13796 627 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 ARRB1P49407 418 aaPredicted RBP16.94■□□□□ 0.3
RAB5C-209ENST00000552162 MCCD1P59942 119 aaPredicted RBP16.94■□□□□ 0.3
RAB5C-209ENST00000552162 RTP5Q14D33 572 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 ZCWPW2Q504Y3 356 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 FBXL19Q6PCT2 694 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 UNC45BQ8IWX7 931 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 SCML4Q8N228 414 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 GUF1Q8N442 669 aaKnown RBP16.94■□□□□ 0.3
RAB5C-209ENST00000552162 FIBINQ8TAL6 211 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 BAP1Q92560 729 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 COL26A1Q96A83 441 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 EEF2KMTQ96G04 330 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 RCOR1Q9UKL0 485 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 INTS6Q9UL03 887 aaKnown RBP16.94■□□□□ 0.3
RAB5C-209ENST00000552162 RAI2Q9Y5P3 530 aa16.94■□□□□ 0.3
RAB5C-209ENST00000552162 TYW5A2RUC4 315 aaKnown RBP16.93■□□□□ 0.3
RAB5C-209ENST00000552162 C10orf142B7Z368 130 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 CMA1P23946 247 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 SLC8A1P32418 973 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 PSMD8P48556 350 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 CCR5P51681 352 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 TBX4P57082 545 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 CUL2Q13617 745 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 CDH18Q13634 790 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 ARID5BQ14865 1188 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 C9orf64Q5T6V5 341 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 NADSYN1Q6IA69 706 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 CARNMT1Q8N4J0 409 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 KDM1BQ8NB78 822 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 SNIP1Q8TAD8 396 aaKnown RBP16.93■□□□□ 0.3
RAB5C-209ENST00000552162 TSC1Q92574 1164 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 SERAC1Q96JX3 654 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 HPSEQ9Y251 543 aa16.93■□□□□ 0.3
RAB5C-209ENST00000552162 ZNF462Q96JM2 2506 aa16.92■□□□□ 0.3
RAB5C-209ENST00000552162 EDDM13A0A1B0GTR0 161 aa16.92■□□□□ 0.3
RAB5C-209ENST00000552162 TTC34A8MYJ7 566 aa16.92■□□□□ 0.3
RAB5C-209ENST00000552162 O00370 1275 aa16.92■□□□□ 0.3
RAB5C-209ENST00000552162 EPB41P11171 864 aaKnown RBP16.92■□□□□ 0.3
RAB5C-209ENST00000552162 CTSOP43234 321 aaPredicted RBP16.92■□□□□ 0.3
RAB5C-209ENST00000552162 ADPRHP54922 357 aa16.92■□□□□ 0.3
RAB5C-209ENST00000552162 NXPH1P58417 271 aa16.92■□□□□ 0.3
RAB5C-209ENST00000552162 RPS24P62847 133 aaKnown RBP16.92■□□□□ 0.3
RAB5C-209ENST00000552162 DPYDQ12882 1025 aa16.92■□□□□ 0.3
RAB5C-209ENST00000552162 EDRF1Q3B7T1 1238 aa16.92■□□□□ 0.3
RAB5C-209ENST00000552162 CBWD6Q4V339 395 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms