RNA–Protein interactions for RNA: ENST00000552017.1

CBX3P5-201, Transcript of chromobox 3 pseudogene 5, humanhuman

BASIC

Gene CBX3P5, Length 521 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P5-201ENST00000552017 XPOTO43592 962 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 STRNO43815 780 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 PIP5K1CO60331 668 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 DKC1O60832 514 aaKnown RBP eCLIP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 NBNO60934 754 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 KATNA1O75449 491 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 CRTAPO75718 401 aaPredicted RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 MBD4O95243 580 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 CAVIN2O95810 425 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 PARP1P09874 1014 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TSPY3P0CV98 308 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TSPY8P0CW00 308 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TOP1P11387 765 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 MTHFD1P11586 935 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 HSD3B1P14060 373 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 CAPN3P20807 821 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 IL32P24001 234 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 GPTP24298 496 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 ACTN2P35609 894 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 SOX6P35712 828 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 MAPK9P45984 424 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 IFNAR2P48551 515 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 AMPHP49418 695 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 SERPINB8P50452 374 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 GUCY2FP51841 1108 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 CACNA2D1P54289 1103 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 RPP38P78345 283 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TSPY1Q01534 308 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 MCL1Q07820 350 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 ITKQ08881 620 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 FRG1Q14331 258 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 CNGA2Q16280 664 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 FUT11Q495W5 492 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TDRD12Q587J7 1177 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 PGM2L1Q6PCE3 622 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 CENPQQ7L2Z9 268 aaPredicted RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 KRT28Q7Z3Y7 464 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TBC1D1Q86TI0 1168 aaPredicted RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 P3H2Q8IVL5 708 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 NKAIN4Q8IVV8 208 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 C12orf56Q8IXR9 622 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 PPM1NQ8N819 430 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 SPC24Q8NBT2 197 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 ZNF540Q8NDQ6 660 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 PJA1Q8NG27 643 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 OR8K3Q8NH51 312 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TBC1D15Q8TC07 691 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 ENKURQ8TC29 256 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 DENND1AQ8TEH3 1009 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 NRG4Q8WWG1 115 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 SHC3Q92529 594 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 SEPT8Q92599 483 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 NCLNQ969V3 563 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 INTS12Q96CB8 462 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 CYFIP2Q96F07 1278 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 ZC3H10Q96K80 434 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 CCDC138Q96M89 665 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 NUDCD1Q96RS6 583 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 STRBPQ96SI9 672 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 PNKPQ96T60 521 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 RMDN3Q96TC7 470 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 EIF3CQ99613 913 aaKnown RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 SDF4Q9BRK5 362 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 PI4K2AQ9BTU6 479 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 FSD1Q9BTV5 496 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TLR10Q9BXR5 811 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 C11orf54Q9H0W9 315 aaPredicted RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 ZSCAN16Q9H4T2 348 aaPredicted RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TTC12Q9H892 705 aaPredicted RBP4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 KIF9Q9HAQ2 790 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TRPV4Q9HBA0 871 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 BLOC1S4Q9NUP1 217 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 RIMKLBQ9ULI2 386 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TMEM5Q9Y2B1 443 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 TMX2Q9Y320 296 aa4.31□□□□□ -1.72
CBX3P5-201ENST00000552017 NCOA3Q9Y6Q9 1424 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 ARHGAP10A1A4S6 786 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 SYNDIG1LA6NDD5 238 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 H0Y626 953 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 K7ESF4 209 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 HAT1O14929 419 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 POLR2DO15514 142 aaKnown RBP4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 MT-CO1P00395 513 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 NPPAP01160 153 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 UBTFL6P0CB48 400 aaPredicted RBP4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 CSF2RAP15509 400 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 SLC8A1P32418 973 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 SLC16A2P36021 539 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 IARSP41252 1262 aaKnown RBP4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 ACADSBP45954 432 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 PHKA1P46020 1223 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 MTIF2P46199 727 aaKnown RBP4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 ACADVLP49748 655 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 RARSP54136 660 aaKnown RBP4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 PDE1BQ01064 536 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 NHLH1Q02575 133 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 NIPAL4Q0D2K0 466 aa4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 TARDBPQ13148 414 aaKnown RBP eCLIP4.3□□□□□ -1.72
CBX3P5-201ENST00000552017 SQLEQ14534 574 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms