RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 TMEM119Q4V9L6 283 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 MBLAC2Q68D91 279 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 BORAQ6PGQ7 559 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 KIAA0907Q7Z7F0 614 aaPredicted RBP14.05□□□□□ -0.16
SNRPF-203ENST00000551316 SCD5Q86SK9 330 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 GPBP1Q86WP2 473 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 DENND1CQ8IV53 801 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 FUKQ8N0W3 1084 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 RDH13Q8NBN7 331 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNRPF-203ENST00000551316 DDI1Q8WTU0 396 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 JPH3Q8WXH2 748 aaPredicted RBP14.05□□□□□ -0.16
SNRPF-203ENST00000551316 WASF1Q92558 559 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 GOLGA1Q92805 767 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 JAKMIP2Q96AA8 810 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 SNX25Q9H3E2 840 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 FZD3Q9NPG1 666 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 CYTH4Q9UIA0 394 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 ODF2LQ9ULJ1 636 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 FZD4Q9ULV1 537 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 CYP46A1Q9Y6A2 500 aa14.05□□□□□ -0.16
SNRPF-203ENST00000551316 TNRC6AQ8NDV7 1962 aaKnown RBP14.04□□□□□ -0.16
SNRPF-203ENST00000551316 CDC45O75419 566 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 AP1G2O75843 785 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 FAM13AO94988 1023 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 GOLGA8FQ08AF8 430 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 GOLGA8DPQ0D2H9 430 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 KCNMA1Q12791 1236 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 ORC2Q13416 577 aaPredicted RBP14.04□□□□□ -0.16
SNRPF-203ENST00000551316 DHX8Q14562 1220 aaKnown RBP14.04□□□□□ -0.16
SNRPF-203ENST00000551316 C10orf120Q5SQS8 335 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 FHL5Q5TD97 284 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 DYMQ7RTS9 669 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 ZC3H18Q86VM9 953 aaKnown RBP14.04□□□□□ -0.16
SNRPF-203ENST00000551316 IQCHQ86VS3 1027 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 FAM217AQ8IXS0 508 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.04□□□□□ -0.16
SNRPF-203ENST00000551316 OR13H1Q8NG92 308 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 MRGPRX3Q96LB0 322 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 OMDQ99983 421 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 SLC4A5Q9BY07 1137 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 FOXP3Q9BZS1 431 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 SYNDIG1Q9H7V2 258 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 PARVGQ9HBI0 331 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 EPB41L5Q9HCM4 733 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 TLR8Q9NR97 1041 aaKnown RBP14.04□□□□□ -0.16
SNRPF-203ENST00000551316 INTS13Q9NVM9 706 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 GGA2Q9UJY4 613 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 DAAM1Q9Y4D1 1078 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 SPG11Q96JI7 2443 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 DCHS2Q6V1P9 2916 aa14.04□□□□□ -0.16
SNRPF-203ENST00000551316 NIPBLQ6KC79 2804 aaeCLIP14.03□□□□□ -0.16
SNRPF-203ENST00000551316 HHLA1C9JL84 531 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 K7EM74 188 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 TACC1O75410 805 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 PPP1R37O75864 691 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 DLDP09622 509 aaKnown RBP14.03□□□□□ -0.16
SNRPF-203ENST00000551316 SLC8A1P32418 973 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 TOB1P50616 345 aaPredicted RBP14.03□□□□□ -0.16
SNRPF-203ENST00000551316 C9orf64Q5T6V5 341 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 SLFN12LQ6IEE8 588 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 MAMDC2Q7Z304 686 aaPredicted RBP14.03□□□□□ -0.16
SNRPF-203ENST00000551316 ATCAYQ86WG3 371 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 DTX1Q86Y01 620 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 CCDC83Q8IWF9 413 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 TMEM145Q8NBT3 493 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 FAM129BQ96TA1 746 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 CBWD1Q9BRT8 395 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 MED10Q9BTT4 135 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 ZHX3Q9H4I2 956 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 SMYD3Q9H7B4 428 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 PDRG1Q9NUG6 133 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 KLHL11Q9NVR0 708 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 PISDQ9UG56 409 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 KCNG1Q9UIX4 513 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 RASAL2Q9UJF2 1139 aa14.03□□□□□ -0.16
SNRPF-203ENST00000551316 CCDC168Q8NDH2 2452 aa14.02□□□□□ -0.16
SNRPF-203ENST00000551316 CROCCQ5TZA2 2017 aa14.02□□□□□ -0.16
SNRPF-203ENST00000551316 TBC1D3DA0A087WVF3 549 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 TBC1D3IA0A087WXS9 549 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 TBC1D3EA0A087X179 549 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 TBC1D3KA0A087X1G2 549 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 EME2A4GXA9 379 aaPredicted RBP14.02□□□□□ -0.17
SNRPF-203ENST00000551316 TBC1D3FA6NER0 549 aaPredicted RBP14.02□□□□□ -0.17
SNRPF-203ENST00000551316 A8MXQ7 604 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 TBC1D3LB9A6J9 549 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 SCAMP1O15126 338 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 MUSKO15146 869 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 CST3P01034 146 aaPredicted RBP14.02□□□□□ -0.17
SNRPF-203ENST00000551316 TBC1D3HP0C7X1 549 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 PABPC1P11940 636 aaKnown RBP14.02□□□□□ -0.17
SNRPF-203ENST00000551316 PRLRP16471 622 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 PLA2G4AP47712 749 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 MAP3K7CLP57077 242 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 HS1BP3Q53T59 392 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 TBC1D3GQ6DHY5 549 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 TBC1D3CQ6IPX1 549 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 RAB11FIP2Q7L804 512 aa14.02□□□□□ -0.17
SNRPF-203ENST00000551316 TBC1D3Q8IZP1 549 aaPredicted RBP14.02□□□□□ -0.17
SNRPF-203ENST00000551316 CPXM2Q8N436 756 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms